RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 FAM92BQ6ZTR7 304 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 MICALCLQ6ZW33 695 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 AMZ2Q86W34 360 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 RASGRP3Q8IV61 690 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 BEND7Q8N7W2 519 aaPredicted RBP11.6□□□□□ -0.55
GABPB1-206ENST00000543881 OR4K2Q8NGD2 314 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 ZNF398Q8TD17 642 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 ELMO2Q96JJ3 720 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 OR6C1Q96RD1 312 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 TRIM55Q9BYV6 548 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 OSBPL8Q9BZF1 889 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 RBSNQ9H1K0 784 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 CASS4Q9NQ75 786 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 SMOXQ9NWM0 555 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.6□□□□□ -0.554e-6■■■■□ 20.4
GABPB1-206ENST00000543881 PSMD13Q9UNM6 376 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 EFR3BQ9Y2G0 817 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 PKP3Q9Y446 797 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 PCDHGA6Q9Y5G7 932 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 MACROD2A1Z1Q3 448 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 STX7O15400 261 aaKnown RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 TOX3O15405 576 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 SGTAO43765 313 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 KCNJ13O60928 360 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 ANXA9O76027 345 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 PRAMEF1O95521 474 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 DDAH2O95865 285 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 CCNYL3P0C7X3 344 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 RBP3P10745 1247 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 PYGMP11217 842 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 CTNNA2P26232 953 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 PBLDP30039 288 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 PTPN7P35236 360 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 DCTP40126 519 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 EIF3EP60228 445 aaKnown RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 XIAPP98170 497 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 DNASE1L3Q13609 305 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 ITGA9Q13797 1035 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 IL11RAQ14626 422 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 TAF1AQ15573 450 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 RPE65Q16518 533 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 EIF2S3LQ2VIR3 472 aaKnown RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 DENND5AQ6IQ26 1287 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 DET1Q7L5Y6 550 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 MAMDC2Q7Z304 686 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 PRSS42Q7Z5A4 293 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 RBM12BQ8IXT5 1001 aaKnown RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 LRRC57Q8N9N7 239 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 ACRBPQ8NEB7 543 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 CCDC110Q8TBZ0 833 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 KLHL6Q8WZ60 621 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 MRFAP1L1Q96HT8 127 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 EPHA6Q9UF33 1036 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 FKBPLQ9UIM3 349 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 LNPEPQ9UIQ6 1025 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 PADI1Q9ULC6 663 aa11.59□□□□□ -0.55
GABPB1-206ENST00000543881 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-206ENST00000543881 A0A0U1RQJ8 604 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CCDC66A2RUB6 948 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 GRID2IPA4D2P6 1211 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 BTNL10A8MVZ5 291 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 KCNN4O15554 427 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 RASSF9O75901 435 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 SRP72O76094 671 aaKnown RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 SORBS2O94875 1100 aaKnown RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 LPOP22079 712 aaPredicted RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 HALP42357 657 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 PGDP52209 483 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 FNBP1LQ5T0N5 605 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CACHD1Q5VU97 1274 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 METRNLQ641Q3 311 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 IRGCQ6NXR0 463 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 DUS1LQ6P1R4 473 aaKnown RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 TMTC1Q8IUR5 882 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CDKL3Q8IVW4 592 aaPredicted RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 OR13C4Q8NGS5 318 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CT55Q8WUE5 264 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 SLC25A23Q9BV35 468 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 ZCCHC2Q9C0B9 1178 aaKnown RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 RAB33BQ9H082 229 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 ACTL8Q9H568 366 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 LUC7LQ9NQ29 371 aaKnown RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 SEMA5BQ9P283 1151 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CFAP20Q9Y6A4 193 aaKnown RBP11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 CENPEQ02224 2701 aa11.58□□□□□ -0.56
GABPB1-206ENST00000543881 IGHV5-51A0A0C4DH38 117 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 GOLGA6L3A6NEY3 463 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 C5orf60A6NFR6 353 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 MGAT4DA6NG13 374 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 C2orf81A6NN90 581 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 AGAP14A8MT82 685 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 TCP11X1B4DZS4 312 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 SPAG6O75602 509 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 TIAF1O95411 115 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 CLDN1O95832 211 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms