RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 NPTX1Q15818 432 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 PLA2G4EQ3MJ16 856 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 UBXN11Q5T124 520 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 TMEM236Q5W0B7 351 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 GPRIN3Q6ZVF9 776 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 LYSMD2Q8IV50 215 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 HS3ST5Q8IZT8 346 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 TADA1Q96BN2 335 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 SCN3BQ9NY72 215 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 RIMKLBQ9ULI2 386 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 CSADQ9Y600 493 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 A0A0G2JLL6 359 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 LOC285095A0A1B0GVY8 99 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 RPP40O75818 363 aaKnown RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 IL1RNP18510 177 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ITKQ08881 620 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 CLCA4Q14CN2 919 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 MARC1Q5VT66 337 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 SLX4IPQ5VYV7 408 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 PRRT2Q7Z6L0 340 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 KIAA1958Q8N8K9 716 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 CCNB1IP1Q9NPC3 277 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 PCDH12Q9NPG4 1184 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 CATSPERZQ9NTU4 200 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ERVK-18Q9QC07 812 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TMEFF2Q9UIK5 374 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ERVW-1Q9UQF0 538 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 NEUROG3Q9Y4Z2 214 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 PRMT5O14744 637 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ASNA1O43681 348 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 RFPL2O75678 378 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ATXN1LP0C7T5 689 aaKnown RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 CD6P30203 668 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 STC1P52823 247 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 IL5RAQ01344 420 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 MN1Q10571 1320 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 MAPK11Q15759 364 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 RBBP7Q16576 425 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TYSND1Q2T9J0 566 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 PAGE2Q7Z2X7 111 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 GALNT13Q8IUC8 556 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 FUBP1Q96AE4 644 aaKnown RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 SMOC2Q9H3U7 446 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TAS2R13Q9NYV9 303 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 KCTD3Q9Y597 815 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 CLDN24A6NM45 220 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 E9PAM4 449 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 H0Y626 953 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 SNPHO15079 494 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 XPNPEP2O43895 674 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TRIM16O95361 564 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 RETP07949 1114 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TUBA1BP68363 451 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TSNQ15631 228 aaKnown RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 PLEKHG6Q3KR16 790 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 Q6ZSR9 355 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 TUBA1AQ71U36 451 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 PSMA8Q8TAA3 256 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 CNIH3Q8TBE1 160 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 LGALS12Q96DT0 336 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF382Q96SR6 550 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ACOX2Q99424 681 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 SH3GL1Q99961 368 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 ALOXE3Q9BYJ1 711 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 MMP27Q9H306 513 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 KAT8Q9H7Z6 458 aaKnown RBP17.34■□□□□ 0.37
RAB40C-205ENST00000539661 POLE4Q9NR33 117 aa17.34■□□□□ 0.37
RAB40C-205ENST00000539661 RHOBTB1O94844 696 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 PTTG1O95997 202 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 HOXD8P13378 290 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 RCVRNP35243 200 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 HUNKP57058 714 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 LSM3P62310 102 aaKnown RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 KEAP1Q14145 624 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 SEMA3AQ14563 771 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 LRIT3Q3SXY7 679 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 SCIMPQ6UWF3 145 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 PLD3Q8IV08 490 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 UMODL1-AS1Q8N2C9 162 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 NKAPQ8N5F7 415 aaKnown RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 FRS2Q8WU20 508 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 RHBDF1Q96CC6 855 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 ZNF486Q96H40 463 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 IPPQ9Y573 584 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 ELOVL7A1L3X0 281 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 LSM1O15116 133 aaKnown RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 DYRK3O43781 588 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 GJA5P36382 358 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 MAXP61244 160 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 NCS1P62166 190 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 IFITM2Q01629 132 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 DSC2Q02487 901 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 RAPSNQ13702 412 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 CATSPEREQ5SY80 951 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 C6orf183Q5T699 404 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 PAQR3Q6TCH7 311 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 CYP20A1Q6UW02 462 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 B3GNT8Q7Z7M8 397 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms