RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 ZCWPW1Q9H0M4 648 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 RABEP2Q9H5N1 569 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 WDCPQ9H6R7 721 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 ABCC13Q9NSE7 274 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 TRMT13Q9NUP7 481 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 TMEM30AQ9NV96 361 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 COMMD8Q9NX08 183 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 TMEM161AQ9NX61 479 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 ARHGEF38Q9NXL2 777 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 ARL2BPQ9Y2Y0 163 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 TTLL3Q9Y4R7 772 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 PCDHB1Q9Y5F3 818 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 GPR45Q9Y5Y3 372 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 PTPRSQ13332 1948 aa4.42□□□□□ -1.7
UBE2D3-230ENST00000510599 ZNF106Q9H2Y7 1883 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 MAGEB16A2A368 324 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 OR6C75A6NL08 312 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 RNF103O00237 685 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 KLF11O14901 512 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CREB3O43889 395 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CACNG3O60359 315 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 EDF1O60869 148 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 AVILO75366 819 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 SPAG7O75391 227 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 ATP5HO75947 161 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 KRT38O76015 456 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 DDHD2O94830 711 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 PARNO95453 639 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TGDSO95455 350 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 AP2A1O95782 977 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 SNRPAP09012 282 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 DHRS4L1P0CG22 281 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 PGAM1P18669 254 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 BDNFP23560 247 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CCNCP24863 283 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 FOXN2P32314 431 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 MAP2K2P36507 400 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 GARSP41250 739 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 SKIV2L2P42285 1042 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 MAGEA11P43364 429 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 NPY2RP49146 381 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CDK7P50613 346 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 NEK3P51956 506 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 PITX1P78337 314 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 POU6F2P78424 691 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TMPRSS15P98073 1019 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CDK18Q07002 472 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 AP1B1Q10567 949 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 MTA1Q13330 715 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TUBB3Q13509 450 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 BFSP2Q13515 415 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 FHL1Q13642 323 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 EFTUD2Q15029 972 aaKnown RBP eCLIP4.41□□□□□ -1.76e-8■■■■■ 34.9
UBE2D3-230ENST00000510599 SLC1A5Q15758 541 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 NFE2Q16621 373 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 GALNTL6Q49A17 601 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TEX44Q53QW1 395 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 SPANXN3Q5MJ09 141 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 RNF187Q5TA31 235 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 FAXCQ5TGI0 409 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 ITPRIPL1Q6GPH6 555 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 MSANTD2Q6P1R3 559 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 LVRNQ6Q4G3 990 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 ZNF66Q6ZN08 573 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 MARK2Q7KZI7 788 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TRPM8Q7Z2W7 1104 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 PID1Q7Z2X4 250 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 PRPF39Q86UA1 669 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TAC4Q86UU9 113 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 JAZF1Q86VZ6 243 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CHSY1Q86X52 802 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 SPATA2LQ8IUW3 424 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 LRRC49Q8IUZ0 686 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CCDC117Q8IWD4 279 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 C10orf67Q8IYJ2 551 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 ZNF567Q8N184 647 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 C4orf33Q8N1A6 199 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 NUP93Q8N1F7 819 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 ARHGAP18Q8N392 663 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 IL17RDQ8NFM7 739 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TET1Q8NFU7 2136 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 OR10T2Q8NGX3 314 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 RAB3IL1Q8TBN0 382 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 RAET1EQ8TD07 263 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TCP10LQ8TDR4 215 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 LRRC8CQ8TDW0 803 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 ACMSDQ8TDX5 336 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 DQX1Q8TE96 717 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 C2orf15Q8WU43 125 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CDKL2Q92772 493 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 OXNAD1Q96HP4 312 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CAPNS2Q96L46 248 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 C8orf48Q96LL4 319 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 CEP295NLQ96MC4 621 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 LGMNQ99538 433 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 TKTL2Q9H0I9 626 aa4.41□□□□□ -1.7
UBE2D3-230ENST00000510599 SMOC2Q9H3U7 446 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms