RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 RAB6CQ9H0N0 254 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 IL25Q9H293 177 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 MBNL1Q9NR56 388 aaKnown RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 PRMT7Q9NVM4 692 aaPredicted RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 ARGLU1Q9NWB6 273 aaPredicted RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 KLHL9Q9P2J3 617 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 POU2F3Q9UKI9 436 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 KCNS2Q9ULS6 477 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 GRIP1Q9Y3R0 1128 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 TAF1P21675 1872 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ZCWPW2A0A1B0GU75 182 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 ELOVL7A1L3X0 281 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 MAGEA13PA6NCF6 341 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 GPR137BO60478 399 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 CELF2O95319 508 aaKnown RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 EEF1B2P24534 225 aaKnown RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 COPB2P35606 906 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 IL15P40933 162 aaPredicted RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 CDKN2AP42771 156 aaKnown RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 LIMK1P53667 647 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 POLGP54098 1239 aaPredicted RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 MLLT10P55197 1068 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 RBP5P82980 135 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 LTBQ06643 244 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 PPIGQ13427 754 aaKnown RBP eCLIP5.24□□□□□ -1.57
SSR3-208ENST00000496050 VWC2Q2TAL6 325 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 PET117Q6UWS5 81 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 GFRALQ6UXV0 394 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 ZBTB49Q6ZSB9 765 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 ASB18Q6ZVZ8 466 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 KMT5CQ86Y97 462 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 RBMXL3Q8N7X1 1067 aaKnown RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 IQUBQ8NA54 791 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 SLC4A11Q8NBS3 891 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 SMRP1Q8NCR6 262 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 OR2AJ1Q8NGZ0 328 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 GOT1L1Q8NHS2 421 aaPredicted RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 BBS10Q8TAM1 723 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 SEMA4DQ92854 862 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 RTP4Q96DX8 246 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 FAM84BQ96KN1 310 aaPredicted RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 CITED2Q99967 270 aaPredicted RBP5.24□□□□□ -1.57
SSR3-208ENST00000496050 SLX1AQ9BQ83 275 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 FNDC11Q9BVV2 318 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 NPAP1Q9NZP6 1156 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 ZNF112Q9UJU3 913 aa5.24□□□□□ -1.57
SSR3-208ENST00000496050 PRSS51A0A1B0GVH4 220 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 MEIS2O14770 477 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 OR52Z1P0C646 297 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 OR2T7P0C7T2 308 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 ZNF23P17027 643 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 GM2AP17900 193 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 ARCN1P48444 511 aaKnown RBP5.23□□□□□ -1.57
SSR3-208ENST00000496050 BRWD1-AS2P59051 145 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 ZNF273Q14593 569 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SLC39A14Q15043 492 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 IRAK1BP1Q5VVH5 260 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 OR7E24Q6IFN5 339 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 KLC3Q6P597 504 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 DCLRE1AQ6PJP8 1040 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SATL1Q86VE3 508 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SFR1Q86XK3 245 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 TMEM219Q86XT9 240 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 ODF3L1Q8IXM7 274 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.23□□□□□ -1.57
SSR3-208ENST00000496050 MUC20Q8N307 709 aaPredicted RBP5.23□□□□□ -1.57
SSR3-208ENST00000496050 PPFIBP2Q8ND30 876 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 ZFAND2BQ8WV99 257 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SMPDL3BQ92485 455 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 FAM162AQ96A26 154 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SPDL1Q96EA4 605 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 VMP1Q96GC9 406 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SFXN2Q96NB2 322 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 ZNF558Q96NG5 402 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 FERMT1Q9BQL6 677 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 TM6SF1Q9BZW5 370 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 SLA2Q9H6Q3 261 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 FKRPQ9H9S5 495 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.23□□□□□ -1.57
SSR3-208ENST00000496050 RHCGQ9UBD6 479 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 RASAL2Q9UJF2 1139 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 OR2W1Q9Y3N9 320 aa5.23□□□□□ -1.57
SSR3-208ENST00000496050 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.23□□□□□ -1.57
SSR3-208ENST00000496050 MED19A0JLT2 244 aaPredicted RBP5.22□□□□□ -1.57
SSR3-208ENST00000496050 ARHGEF37A1IGU5 675 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 HNRNPCL2B2RXH8 293 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 ZNF587BE7ETH6 402 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 TMEM178BH3BS89 294 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 PSMA7O14818 248 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 EIF3DO15371 548 aaKnown RBP eCLIP5.22□□□□□ -1.57
SSR3-208ENST00000496050 WDR1O75083 606 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 LDB3O75112 727 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 TOMM70O94826 608 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 PENKP01210 267 aaPredicted RBP5.22□□□□□ -1.57
SSR3-208ENST00000496050 TFAP2AP05549 437 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 HOXC8P31273 242 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 HOXC13P31276 330 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 CCKBRP32239 447 aa5.22□□□□□ -1.57
SSR3-208ENST00000496050 HSPA4P34932 840 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms