RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 C1orf21Q9H246 121 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 OXSMQ9NWU1 459 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 VPS51Q9UID3 782 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 SNX6Q9UNH7 406 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D30Q9Y2I9 924 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 PCDHB1Q9Y5F3 818 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 A8MT66 165 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 ADAM12O43184 909 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 MAPK9P45984 424 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 TNK2Q07912 1038 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 SCAPQ12770 1279 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 CSTF3Q12996 717 aaKnown RBP11.16□□□□□ -0.62
SMPD4-218ENST00000482171 MYLK3Q32MK0 819 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 LY6G5CQ5SRR4 150 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 ALKAL1Q6UXT8 129 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 KCTD8Q6ZWB6 473 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 FAM9CQ8IZT9 166 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 C12orf76Q8N812 135 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-218ENST00000482171 UTP15Q8TED0 518 aaKnown RBP11.16□□□□□ -0.62
SMPD4-218ENST00000482171 KIFC1Q9BW19 673 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 FANCEQ9HB96 536 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 CACNA2D2Q9NY47 1150 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 USE1Q9NZ43 259 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 ZDHHC2Q9UIJ5 367 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
SMPD4-218ENST00000482171 A0A088AWK7 358 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ZNF487B1APH4 448 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 K7ERQ8 282 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 AXIN1O15169 862 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 CYP11A1P05108 521 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 CD68P34810 354 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 NIPAL4Q0D2K0 466 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 LCP2Q13094 533 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 IRF5Q13568 498 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 PCLAFQ15004 111 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 C6orf183Q5T699 404 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 OGFOD2Q6N063 350 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TMEM26Q6ZUK4 368 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ASZ1Q8WWH4 475 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TSGA13Q96PP4 275 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 CHID1Q9BWS9 393 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 MFSD1Q9H3U5 465 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 EPB41L1Q9H4G0 881 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 KCTD5Q9NXV2 234 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 LEF1Q9UJU2 399 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 U3KQV3 271 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3DA0A087WVF3 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3IA0A087WXS9 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3EA0A087X179 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3KA0A087X1G2 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3FA6NER0 549 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3LB9A6J9 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 NBNO60934 754 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 STC2O76061 302 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3HP0C7X1 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 EFNA1P20827 205 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 PTGER3P43115 390 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ARSDP51689 593 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 CHRNA6Q15825 494 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3GQ6DHY5 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3CQ6IPX1 549 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 OOSP2Q86WS3 158 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 RALGPS2Q86X27 583 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TBC1D3Q8IZP1 549 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TAMM41Q96BW9 452 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 PPP3R2Q96LZ3 170 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 UGT2B28Q9BY64 529 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 TDP1Q9NUW8 608 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ZNF490Q9ULM2 529 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 A0A1W2PPW3 197 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 SLC22A3O75751 556 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 RNASEH2AO75792 299 aaKnown RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ESR1P03372 595 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ZNF12P17014 697 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ALDH4A1P30038 563 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 CYP4F2P78329 520 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ARSIQ5FYB1 569 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 MBLAC2Q68D91 279 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 SLC39A5Q6ZMH5 540 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 CFAP206Q8IYR0 622 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 UMODL1-AS1Q8N2C9 162 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 STX19Q8N4C7 294 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 UBASH3BQ8TF42 649 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ZHX1-C8orf76Q96EF9 292 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 SEZ6LQ9BYH1 1024 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 SUV39H2Q9H5I1 410 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ZDHHC4Q9NPG8 344 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 IMP3Q9NV31 184 aaKnown RBP11.15□□□□□ -0.62
SMPD4-218ENST00000482171 GALPQ9UBC7 116 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 GIMAP2Q9UG22 337 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ASB3Q9Y575 518 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 KCNE2Q9Y6J6 123 aa11.15□□□□□ -0.62
SMPD4-218ENST00000482171 ANKDD1BA6NHY2 528 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 H0Y858 1186 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 H3BM21 787 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms