RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
USP11-206ENST00000469080 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 OR5H6Q8NGV6 325 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 ACOX2Q99424 681 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 EPS8L2Q9H6S3 715 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 EGFL7Q9UHF1 273 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 VPS4AQ9UN37 437 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 TLR6Q9Y2C9 796 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 PABPN1LA6NDY0 278 aaKnown RBP12.18□□□□□ -0.46
USP11-206ENST00000469080 CAPN14A8MX76 684 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 SCAMP1O15126 338 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 LRG1P02750 347 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 IFI30P13284 250 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 ATF6P18850 670 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 CNTFP26441 200 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 TSNQ15631 228 aaKnown RBP12.18□□□□□ -0.46
USP11-206ENST00000469080 C6orf10Q5SRN2 563 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 TSTD2Q5T7W7 516 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 MRNIPQ6NTE8 343 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 UGT3A1Q6NUS8 523 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 PAQR3Q6TCH7 311 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 DNAJB7Q7Z6W7 309 aaPredicted RBP12.18□□□□□ -0.46
USP11-206ENST00000469080 TMEM135Q86UB9 458 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 MIER2Q8N344 545 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 ZCCHC7Q8N3Z6 543 aaKnown RBP12.18□□□□□ -0.46
USP11-206ENST00000469080 TANKQ92844 425 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 NARFLQ9H6Q4 476 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 DNAJC28Q9NX36 388 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 M0QZQ0 153 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 TRIM24O15164 1050 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 EOMESO95936 686 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 COX4I1P13073 169 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 RHOQP17081 205 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 AKT1P31749 480 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 MC4RP32245 332 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CDKN2DP55273 166 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 IL1RL1Q01638 556 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ADGRE1Q14246 886 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CAPRIN1Q14444 709 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 LRIT3Q3SXY7 679 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 BEND7Q8N7W2 519 aaPredicted RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 CDYL2Q8N8U2 506 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ANGPTL6Q8NI99 470 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CLPBQ9H078 707 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 PCDHAC1Q9H158 963 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 SLC25A51Q9H1U9 297 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 PNPLA3Q9NST1 481 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CATSPERZQ9NTU4 200 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CFAP97Q9P2B7 532 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 RAI2Q9Y5P3 530 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 MAGEB16A2A368 324 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 NPEPPSL1A6NEC2 478 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 TNFRSF10BO14763 440 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 SCO2O43819 266 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 RFPL2O75678 378 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 XPAP23025 273 aaPredicted RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 GALNT1Q10472 559 aaPredicted RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 KLF10Q13118 480 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 FLOT2Q14254 428 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ZNF846Q147U1 533 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 DDX53Q86TM3 631 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 CCDC103Q8IW40 242 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 MFSD6LQ8IWD5 586 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CMTM8Q8IZV2 173 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ZNF276Q8N554 614 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 SIDT2Q8NBJ9 832 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 SPPL2BQ8TCT7 592 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 SORCS1Q8WY21 1168 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CMTM5Q96DZ9 223 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 DMRTB1Q96MA1 342 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 UROC1Q96N76 676 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 RPRD1BQ9NQG5 326 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 TOR4AQ9NXH8 423 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 C2orf81A6NN90 581 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 CCNT2O60583 730 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 MPOP05164 745 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 M6PRP20645 277 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 TM4SF4P48230 202 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 AGTR2P50052 363 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 SLC13A2Q13183 592 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 LIPMQ5VYY2 423 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ADCY4Q8NFM4 1077 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 NUDT8Q8WV74 236 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ACDQ96AP0 544 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 GIMAP5Q96F15 307 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 C7orf26Q96N11 449 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 FCRL5Q96RD9 977 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 OSBPL2Q9H1P3 480 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 TOR3AQ9H497 397 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 ZDHHC6Q9H6R6 413 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 GMPR2Q9P2T1 348 aaKnown RBP12.17□□□□□ -0.46
USP11-206ENST00000469080 B3GNT3Q9Y2A9 372 aa12.17□□□□□ -0.46
USP11-206ENST00000469080 SCN4AP35499 1836 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms