RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 GPR39O43194 453 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 KCNJ13O60928 360 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 ATP13A4Q4VNC1 1196 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 CCDC183Q5T5S1 534 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 TADA1Q96BN2 335 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 BPIFA1Q9NP55 256 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 POMT2Q9UKY4 750 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 PKDREJQ9NTG1 2253 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 CNTRLQ7Z7A1 2325 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 ANKRD12Q6UB98 2062 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 LRRC53A6NM62 1247 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 ALPPP05187 535 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 MSL3P1P0C860 447 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 ITGA3P26006 1051 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 PER3P56645 1201 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 SOX8P57073 446 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 FOXL2P58012 376 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 PIGHQ14442 188 aaPredicted RBP16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 METRNLQ641Q3 311 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 CPNE8Q86YQ8 564 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 ZADH2Q8N4Q0 377 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 PQLC3Q8N755 202 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 GRHL3Q8TE85 626 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 HDAC11Q96DB2 347 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 IMP4Q96G21 291 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 FER1L6-AS2Q96M78 137 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 GPR63Q9BZJ6 419 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 ISCUQ9H1K1 167 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 HSD3B7Q9H2F3 369 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 KIR3DX1Q9H7L2 352 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 AGPAT4Q9NRZ5 378 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 MYO6Q9UM54 1294 aa16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 NOVA2Q9UNW9 492 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-209ENST00000454428 CNOT3O75175 753 aaKnown RBP16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 MYBL1P10243 752 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 POLR2CP19387 275 aaPredicted RBP16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 CYP2A7P20853 494 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 HADHAP40939 763 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 IFI35P80217 286 aaPredicted RBP16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 GTF2H3Q13889 308 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 SSPNQ14714 243 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 CLEC1AQ8NC01 280 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 FAF2Q96CS3 445 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 LURAP1Q96LR2 239 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 NRTNQ99748 197 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 DPH2Q9BQC3 489 aaPredicted RBP16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 DHRS4Q9BTZ2 278 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 CEP41Q9BYV8 373 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 WWP1Q9H0M0 922 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 NUP62CLQ9H1M0 184 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 FANCEQ9HB96 536 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 IL26Q9NPH9 171 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 C1GALT1Q9NS00 363 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 P4HTMQ9NXG6 502 aa16.69■□□□□ 0.26
UBE2D4-209ENST00000454428 OR2AG2A6NM03 316 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 H3BMH7 237 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 ZNF749O43361 778 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 LDB2O43679 373 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A9O60656 530 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 IPO13O94829 963 aaKnown RBP16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 STSP08842 583 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 CBSLP0DN79 551 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 EDN3P14138 238 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 ST6GAL1P15907 406 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A6P19224 532 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A1P22309 533 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A4P22310 534 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 CBSP35520 551 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 LMAN1P49257 510 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 ADCY2Q08462 1091 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 XRCC4Q13426 336 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 PCSK7Q16549 785 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 HIF1AQ16665 826 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 ZXDCQ2QGD7 858 aaPredicted RBP16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 MYO7BQ6PIF6 2116 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 TMEM220Q6QAJ8 160 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 PPP1R32Q7Z5V6 425 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 BEND7Q8N7W2 519 aaPredicted RBP16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 GDAP1Q8TB36 358 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 BRSK1Q8TDC3 778 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 ZFPM2Q8WW38 1151 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 IP6K3Q96PC2 410 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 WDR77Q9BQA1 342 aaPredicted RBP16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A7Q9HAW7 530 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A10Q9HAW8 530 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 UGT1A8Q9HAW9 530 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 SYTL2Q9HCH5 934 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 PADI2Q9Y2J8 665 aa16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 DNMT3AQ9Y6K1 912 aaPredicted RBP16.68■□□□□ 0.26
UBE2D4-209ENST00000454428 HEATR9A2RTY3 570 aa16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 C9J4A7 227 aa16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 GAPDHSO14556 408 aaPredicted RBP16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 CDH3P22223 829 aa16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 PBLDP30039 288 aaPredicted RBP16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 PRKCIP41743 596 aa16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 PREPP48147 710 aa16.67■□□□□ 0.26
UBE2D4-209ENST00000454428 PPIDQ08752 370 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms