RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 MAGED2Q9UNF1 606 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 WBP11Q9Y2W2 641 aaKnown RBP4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 MFHAS1Q9Y4C4 1052 aa4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCDHGB2Q9Y5G2 931 aa4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCDHGA5Q9Y5G8 931 aa4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCDHA8Q9Y5H6 950 aa4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCDHA1Q9Y5I3 950 aa4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 NSD3Q9BZ95 1437 aa4.69□□□□□ -1.66
HMGB3P9-201ENST00000441799 RFX7Q2KHR2 1363 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 RTL9Q8NET4 1388 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLIT1O75093 1534 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 TCP11X1B4DZS4 312 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM227AF5H4B4 570 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 F8W036 122 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SNAP23O00161 211 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 TOR1AO14656 332 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLC30A4O14863 429 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF263O14978 683 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 AP5Z1O43299 807 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SEC14L5O43304 696 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 HTRA2O43464 458 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 B4GAT1O43505 415 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 VEGFDO43915 354 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 PPP6R2O75170 966 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CDH16O75309 829 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 VPS4BO75351 444 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 TUSC2O75896 110 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CLPXO76031 633 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DDAH1O94760 285 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 PDE8BO95263 885 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ATP6V1G2O95670 118 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ONECUT2O95948 504 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 APOA1P02647 267 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CALB1P05937 261 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM86B2P0C5J1 330 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 GFAPP14136 432 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ADRA1DP25100 572 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CD1BP29016 333 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CDC25AP30304 524 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 OXTRP30559 389 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CASP14P31944 242 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 MCM7P33993 719 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 IGHMBP2P38935 993 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 LEPRP48357 1165 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLC1A6P48664 564 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 HOXA1P49639 335 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLC26A2P50443 739 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DNM2P50570 870 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 AGFG1P52594 562 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 RIDAP52758 137 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CRYBB1P53674 252 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DCDC1P59894 354 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 TUBB4BP68371 445 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ATP2C1P98194 919 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 NPRL3Q12980 569 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DMP1Q13316 513 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 KLF1Q13351 362 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ITGA9Q13797 1035 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CBFBQ13951 182 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DGCR6Q14129 220 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 LTB4RQ15722 352 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CAMK4Q16566 473 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DUSP28Q4G0W2 176 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 KLHL26Q53HC5 615 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM69AQ5T7M9 428 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 FOXB2Q5VYV0 432 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLFN12LQ6IEE8 588 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 SULT6B1Q6IMI4 303 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 COLCA1Q6ZS62 124 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 OTOAQ7RTW8 1153 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 PEX26Q7Z412 305 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 PRUNE1Q86TP1 453 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 LINC00523Q86TU6 105 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 NME9Q86XW9 330 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 C1orf210Q8IVY1 113 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DDIASQ8IXT1 998 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 IFT20Q8IY31 132 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 GPR65Q8IYL9 337 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ENTHD1Q8IYW4 607 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZBED8Q8IZ13 594 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 RCOR2Q8IZ40 523 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 AOPEPQ8N6M6 819 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 NOA1Q8NC60 698 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 AKR7LQ8NHP1 331 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 LKAAEAR1Q8TD35 194 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 KCTD4Q8WVF5 259 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ROBO4Q8WZ75 1007 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 ST8SIA4Q92187 359 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 MRPS27Q92552 414 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DPF1Q92782 380 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 MTFMTQ96DP5 389 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM120BQ96EK7 910 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 STAMBPL1Q96FJ0 436 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM89AQ96GI7 184 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DNAJC1Q96KC8 554 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 PPP1R36Q96LQ0 422 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 P2RX7Q99572 595 aaKnown RBP4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 DPYSL5Q9BPU6 564 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 CHID1Q9BWS9 393 aa4.68□□□□□ -1.66
HMGB3P9-201ENST00000441799 MRPL4Q9BYD3 311 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms