RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 IRGCQ6NXR0 463 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 CEACAM20Q6UY09 585 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 ZFAND4Q86XD8 727 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 SLC35F6Q8N357 371 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 PRELID2Q8N945 189 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 GPR150Q8NGU9 434 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 OR4L1Q8NH43 312 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 ZFPM2Q8WW38 1151 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 HDAC10Q969S8 669 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 MAGOHBQ96A72 148 aaKnown RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 C9orf72Q96LT7 481 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 TEFMQ96QE5 360 aaKnown RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 CCNL2Q96S94 520 aaPredicted RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 INSM2Q96T92 566 aaPredicted RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 DDA1Q9BW61 102 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 IL22Q9GZX6 179 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 CPNE5Q9HCH3 593 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 FOXJ2Q9P0K8 574 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 TCAF1Q9Y4C2 921 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 PCDHGA3Q9Y5H0 932 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 B3GALT1Q9Y5Z6 326 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 GOLGA6L10A0A0M3HER8 536 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 OR51F1A6NGY5 319 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 PGRMC1O00264 195 aaKnown RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 POLR1CO15160 346 aaPredicted RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 SGTAO43765 313 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 GOT2P00505 430 aaKnown RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 KRT14P02533 472 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 FTH1P02794 183 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 ANKRD34CP0C6C1 535 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 OR56A5P0C7T3 313 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 PSMA3P25788 255 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 FOXN2P32314 431 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 VPS41P49754 854 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 SEPHS1P49903 392 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 TERF1P54274 439 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 CDK16Q00536 496 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 MC2RQ01718 297 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 FOXM1Q08050 763 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 VAC14Q08AM6 782 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 TGIF1Q15583 401 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 CACHD1Q5VU97 1274 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 ANKS6Q68DC2 871 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 CERS6Q6ZMG9 384 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 FAM92BQ6ZTR7 304 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 OOSP2Q86WS3 158 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 PIANPQ8IYJ0 282 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 RASGEF1CQ8N431 466 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 CLDN19Q8N6F1 224 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 OR13J1Q8NGT2 312 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 JPH3Q8WXH2 748 aaPredicted RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 RSC1A1Q92681 617 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 PEX13Q92968 403 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 MS4A14Q96JA4 679 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 FERD3LQ96RJ6 166 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 ZPBPQ9BS86 351 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 TSSK1BQ9BXA7 367 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 AP1M1Q9BXS5 423 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 COG4Q9H9E3 785 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 FBXO8Q9NRD0 319 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 OGFRQ9NZT2 677 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 SLC2A6Q9UGQ3 507 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 TTC7AQ9ULT0 858 aaPredicted RBP10.95□□□□□ -0.66
RFFL-204ENST00000414419 CACNA1GO43497 2377 aa10.95□□□□□ -0.66
RFFL-204ENST00000414419 LIN7AO14910 233 aaPredicted RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 TPSB2P20231 275 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 LEPRP48357 1165 aaKnown RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 ARL4DP49703 201 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 GPS1Q13098 491 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 PRKAA1Q13131 559 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 RPA4Q13156 261 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 TPSAB1Q15661 275 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 SYTL3Q4VX76 610 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 AARS2Q5JTZ9 985 aaKnown RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 CAPRIN2Q6IMN6 1127 aaKnown RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 DUS1LQ6P1R4 473 aaKnown RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 CYB5D1Q6P9G0 228 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 PACS1Q6VY07 963 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 LILRA3Q8N6C8 439 aaPredicted RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 OTUD6BQ8N6M0 293 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 IL22RA1Q8N6P7 574 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 BMPERQ8N8U9 685 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 ZSCAN1Q8NBB4 408 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 GRK7Q8WTQ7 553 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 ELMO1Q92556 727 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 RMDN2Q96LZ7 410 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 ZNF778Q96MU6 729 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 UBL7Q96S82 380 aaPredicted RBP10.94□□□□□ -0.66
RFFL-204ENST00000414419 OSBPL9Q96SU4 736 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 CTRCQ99895 268 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 RAB33BQ9H082 229 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 KCNF1Q9H3M0 494 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 ZNF768Q9H5H4 540 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms