RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 NAT16Q8N8M0 369 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 NOA1Q8NC60 698 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 DENND6BQ8NEG7 585 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 OR52K2Q8NGK3 314 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SETD6Q8TBK2 473 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SUN5Q8TC36 379 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 C2orf15Q8WU43 125 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ANKRD49Q8WVL7 239 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TFAP2BQ92481 460 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 HOXB13Q92826 284 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 FGF14Q92915 247 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PSMG2Q969U7 264 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SLC22A18Q96BI1 424 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 RSPRY1Q96DX4 576 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PERPQ96FX8 193 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 EGLN2Q96KS0 407 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 HEXIM2Q96MH2 286 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GCNAQ96QF7 691 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SMOQ99835 787 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 FOXB1Q99853 325 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ZSWIM1Q9BR11 485 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CDADC1Q9BWV3 514 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 NELFAQ9H3P2 528 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TPK1Q9H3S4 243 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GSX1Q9H4S2 264 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 EPHX3Q9H6B9 360 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 C12orf10Q9HB07 376 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CYP3A43Q9HB55 503 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TRPC7Q9HCX4 862 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SIX2Q9NPC8 291 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ACP6Q9NPH0 428 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SLAMF7Q9NQ25 335 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PCDHB16Q9NRJ7 776 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 MARCH4Q9P2E8 410 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ARHGAP20Q9P2F6 1191 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CRNNQ9UBG3 495 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 LIMA1Q9UHB6 759 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 BAIAP2L1Q9UHR4 511 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SLC12A6Q9UHW9 1150 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CDH7Q9ULB5 785 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 NR2E1Q9Y466 385 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PCDHB4Q9Y5E5 795 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 X6R8D5 127 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 COL4A3Q01955 1670 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 DOCK8Q8NF50 2099 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 ATP8B3O60423 1300 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 PTPRDP23468 1912 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-202ENST00000409915 SMIM31A0A1B0GVY4 71 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 A0A1W2PRV1 198 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 CTAGE9A4FU28 777 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 MAGEA13PA6NCF6 341 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 C2orf78A6NCI8 922 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A18PA6NE21 464 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A16PA6NEW6 464 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 LIPT2A6NK58 231 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 SIGLEC16A6NMB1 481 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A9PA6NNJ1 464 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A5PA8MXJ8 464 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 MYO1GB0I1T2 1018 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 E9PBE3 544 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 RAB27BO00194 218 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 F2RL2O00254 374 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 EPHB6O15197 1021 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 CYP26A1O43174 497 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 DCXO43602 365 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 DYRK3O43781 588 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 OPHN1O60890 802 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 GUCY1B2O75343 617 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 SUPT3HO75486 399 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 NOL4O94818 638 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 CBX7O95931 251 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 PDGFBP01127 241 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-202ENST00000409915 IFNB1P01574 187 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 OPN1MWP04001 364 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 ANXA6P08133 673 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A15PP0C7V4 464 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A14PP0C7W9 464 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 OPN1MW2P0DN77 364 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 OPN1MW3P0DN78 364 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 KRT5P13647 590 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF18P17022 549 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 PFKLP17858 780 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 CASP14P31944 242 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 VIPR2P41587 438 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 MAGEA11P43364 429 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 IFNAR2P48551 515 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 PIK3CGP48736 1102 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 PGFP49763 221 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 HNMTP50135 292 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 EPHA5P54756 1037 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 B2MP61769 119 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 DR1Q01658 176 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 GCNT1Q02742 428 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 CETN1Q12798 172 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 SMARCB1Q12824 385 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 TAF10Q12962 218 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 RCN2Q14257 317 aa4.53□□□□□ -1.68
SF3B1-202ENST00000409915 KPNB1Q14974 876 aaKnown RBP4.53□□□□□ -1.68
SF3B1-202ENST00000409915 NTRK2Q16620 822 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms