RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 MINDY1Q8N5J2 469 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 DACH2Q96NX9 599 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 ATOH8Q96SQ7 321 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 BOCQ9BWV1 1114 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 PCDHB9Q9Y5E1 797 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 ANXA6P08133 673 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 MBL2P11226 248 aaPredicted RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 NR4A2P43354 598 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 HCAR3P49019 387 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 CLK1P49759 484 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 CCL23P55773 120 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 ATXN7L2Q5T6C5 722 aaPredicted RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 INTS11Q5TA45 600 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 PTRHD1Q6GMV3 140 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 FAM180BQ6P0A1 224 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 TMEM53Q6P2H8 277 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 Q6ZSR9 355 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 SLC22A16Q86VW1 577 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 TMEM199Q8N511 208 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 CGREF1Q99674 301 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 POLR1EQ9GZS1 481 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 GIN1Q9NXP7 522 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 PADI4Q9UM07 663 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 PRAMEF12O95522 483 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 CPSF4O95639 269 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 GLUD1P00367 558 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 TNFRSF1BP20333 461 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 CA8P35219 290 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 PCYT1AP49585 367 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 FAM214AQ32MH5 1076 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 PLD3Q8IV08 490 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 CACTIN-AS1Q8N1I8 211 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 ATG16L2Q8NAA4 619 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 FAM118AQ9NWS6 357 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 SMIM30A4D0T7 59 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 B4GALT3O60512 393 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 GPIP06744 558 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 CD97P48960 835 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 ACADVLP49748 655 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 COLEC12Q5KU26 742 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 ZNF773Q6PK81 442 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 VTCN1Q7Z7D3 282 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 DENND1CQ8IV53 801 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 EGLN2Q96KS0 407 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 OR52E6Q96RD3 313 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 LRRC3Q9BY71 257 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 PADI3Q9ULW8 664 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 SLC7A4O43246 635 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 LCKP06239 509 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 COL6A1P12109 1028 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 HLCSP50747 726 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 IL2P60568 153 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 IFITM3Q01628 133 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 LIX1Q8N485 282 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 RORBQ92753 470 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 BBS2Q9BXC9 721 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 DPY30Q9C005 99 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 INTS10Q9NVR2 710 aaKnown RBP16.49■□□□□ 0.23
SIPA1-201ENST00000394224 PAK1IP1Q9NWT1 392 aaPredicted RBP16.49■□□□□ 0.23
SIPA1-201ENST00000394224 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 KIF17Q9P2E2 1029 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 MYO1DO94832 1006 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 PGLSO95336 258 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 ANGPTL1O95841 491 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 MOGQ16653 247 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 C6orf141Q5SZD1 244 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 MDGA1Q8NFP4 955 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.49■□□□□ 0.23
SIPA1-201ENST00000394224 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 CINPQ9BW66 212 aaPredicted RBP16.49■□□□□ 0.23
SIPA1-201ENST00000394224 MFSD1Q9H3U5 465 aa16.49■□□□□ 0.23
SIPA1-201ENST00000394224 RPP40O75818 363 aaKnown RBP16.48■□□□□ 0.23
SIPA1-201ENST00000394224 ATXN1LP0C7T5 689 aaKnown RBP16.48■□□□□ 0.23
SIPA1-201ENST00000394224 HSD17B1P14061 328 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 CRHBPP24387 322 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 RPL34P49207 117 aaKnown RBP16.48■□□□□ 0.23
SIPA1-201ENST00000394224 CRYBB1P53674 252 aaPredicted RBP16.48■□□□□ 0.23
SIPA1-201ENST00000394224 UPP1Q16831 310 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 KANK2Q63ZY3 851 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 XAF1Q6GPH4 301 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 GPR153Q6NV75 609 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 KIAA0408Q6ZU52 694 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 MFSD2AQ8NA29 543 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 OR56A4Q8NGH8 313 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 NSMCE3Q96MG7 304 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 AARSD1Q9BTE6 412 aaKnown RBP16.48■□□□□ 0.23
SIPA1-201ENST00000394224 SMOC2Q9H3U7 446 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
SIPA1-201ENST00000394224 WWOXQ9NZC7 414 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 FBXO10Q9UK96 956 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 PCDHGA4Q9Y5G9 962 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 ORC6Q9Y5N6 252 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 VPS26AO75436 327 aa16.48■□□□□ 0.23
SIPA1-201ENST00000394224 DCKP27707 260 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms