RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Tmem98Q91X86 226 aa14.58□□□□□ -0.08
Nup88-202ENSMUST00000108530 Lrrc17Q9CXD9 443 aa14.58□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ilf2Q9CXY6 390 aaKnown RBP14.58□□□□□ -0.08
Nup88-202ENSMUST00000108530 Habp4Q9JKS5 411 aaKnown RBP14.58□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cdkl2Q9QUK0 568 aa14.58□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cep290Q6A078 2472 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cyp2a22B2RXZ2 492 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Olfr652B9EHE6 318 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm4969D3YZT1 566 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm2956E9PVJ0 216 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pabpc4lG5E8X2 370 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Galnt1O08912 559 aaKnown RBP14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Rps17P63276 135 aaKnown RBP14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zfp956Q3UZY6 572 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Usp8Q80U87 1080 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Chst8Q8BQ86 417 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 B130006D01RikQ8BRH6 153 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ccdc28bQ8CEG5 200 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Olfr45Q8VGM1 311 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Hacd2Q9D3B1 254 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Nkx2-4Q9EQM3 354 aa14.57□□□□□ -0.08
Nup88-202ENSMUST00000108530 Olfr663A0A1B0GSI9 319 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Fam131cA2ADB2 273 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm13119B1ARV5 481 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 E2f3O35261 457 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 CflarO35732 481 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Entpd2O55026 495 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Rtn2O70622 471 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Hspa4lP48722 838 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Mmp11Q02853 492 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pcnx4Q3UVY5 1174 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 EndouQ3V188 412 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pacs2Q3V3Q7 862 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm5800Q497L3 186 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pde1aQ61481 565 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vrk2Q8BN21 503 aaKnown RBP14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Peli3Q8BXR6 445 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 SntnQ8C9X1 147 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Rdh13Q8CEE7 334 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Defb36Q8K3U4 67 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Nsmce2Q91VT1 247 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Adgrl4Q923X1 739 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tspan1Q99J59 240 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 5530400C23RikQ9D3I0 173 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Carm1Q9WVG6 608 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm28168A0A087WNP1 180 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn1r55E9Q8I6 310 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Olfr319L7MTY4 306 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 RfngO09009 332 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Apoa4P06728 395 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gstm1P10649 218 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 RpsaP14206 295 aaKnown RBP14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 CartptP56388 129 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cyth2P63034 400 aaKnown RBP14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 PrtgQ2EY15 1191 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Lrrn4clQ3TYX2 239 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Il10raQ61727 575 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 XpaQ64267 272 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zzz3Q6KAQ7 910 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 InavaQ7TN12 663 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Otud7aQ8R554 926 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Acsf2Q8VCW8 615 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Moxd1Q9CXI3 613 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Dusp26Q9D700 211 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ddi1Q9DAF3 408 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 Il22Q9JJY9 179 aa14.56□□□□□ -0.08
Nup88-202ENSMUST00000108530 B020011L13RikA0A087WQI7 412 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Btnl6A2CG22 539 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Nipsnap3aB1AWZ3 247 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm4871D3Z0W7 314 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Rgs4O08899 205 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pdlim1O70400 327 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 P01664 111 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Hoxa4P06798 285 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Svs4P18419 113 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gpc4P51655 557 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ythdf1P59326 559 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Rbm15Q0VBL3 962 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 CamkvQ3UHL1 512 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zbtb16Q3UQ17 673 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Marveld2Q3UZP0 555 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gpr165Q3V3A3 455 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Rspo2Q8BFU0 243 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Exd1Q8CDF7 570 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pcdhga9Q91XX9 932 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cyp4f15Q99N18 534 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Utp11Q9CZJ1 253 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 HaghlQ9DB32 283 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gpc1Q9QZF2 557 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm3147A0A0J9YU88 481 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm10424A0A0J9YVD0 481 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm10718D3Z1I7 227 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zfp871G5E905 615 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gm7971J3QMM8 481 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Kcnk4O88454 398 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tk1P04184 233 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Il1rl1P14719 567 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Alox12P39655 663 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Hcls1P49710 486 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pfkfb2P70265 519 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms