Protein–RNA interactions for Protein: E9Q8I6

Vmn1r55, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r55E9Q8I6 Gm25239-201ENSMUST00000174915 86 ntBASIC39.31■■■■□ 3.88
Vmn1r55E9Q8I6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Vmn1r55E9Q8I6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Vmn1r55E9Q8I6 Gm15042-201ENSMUST00000120212 883 ntBASIC34.35■■■■□ 3.09
Vmn1r55E9Q8I6 Gm24109-201ENSMUST00000175489 103 ntBASIC34.04■■■■□ 3.04
Vmn1r55E9Q8I6 Gm15045-201ENSMUST00000117359 883 ntBASIC33.56■■■□□ 2.96
Vmn1r55E9Q8I6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Vmn1r55E9Q8I6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Vmn1r55E9Q8I6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Vmn1r55E9Q8I6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Vmn1r55E9Q8I6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Vmn1r55E9Q8I6 Gm23366-201ENSMUST00000175022 89 ntBASIC32.86■■■□□ 2.85
Vmn1r55E9Q8I6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Vmn1r55E9Q8I6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Vmn1r55E9Q8I6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Vmn1r55E9Q8I6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Vmn1r55E9Q8I6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.76■■■□□ 2.67
Vmn1r55E9Q8I6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Vmn1r55E9Q8I6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.66■■■□□ 2.66
Vmn1r55E9Q8I6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Vmn1r55E9Q8I6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.53■■■□□ 2.64
Vmn1r55E9Q8I6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Vmn1r55E9Q8I6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.63
Vmn1r55E9Q8I6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Vmn1r55E9Q8I6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Vmn1r55E9Q8I6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Vmn1r55E9Q8I6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Vmn1r55E9Q8I6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Vmn1r55E9Q8I6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Vmn1r55E9Q8I6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Vmn1r55E9Q8I6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.06■■■□□ 2.56
Vmn1r55E9Q8I6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.04■■■□□ 2.56
Vmn1r55E9Q8I6 Gm25238-201ENSMUST00000174914 89 ntBASIC31.02■■■□□ 2.56
Vmn1r55E9Q8I6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Vmn1r55E9Q8I6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Vmn1r55E9Q8I6 Psd-208ENSMUST00000224556 2034 ntBASIC30.74■■■□□ 2.51
Vmn1r55E9Q8I6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Vmn1r55E9Q8I6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
Vmn1r55E9Q8I6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.46■■■□□ 2.47
Vmn1r55E9Q8I6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Vmn1r55E9Q8I6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.29■■■□□ 2.44
Vmn1r55E9Q8I6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Vmn1r55E9Q8I6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.13■■■□□ 2.41
Vmn1r55E9Q8I6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Vmn1r55E9Q8I6 Gm27325-201ENSMUST00000175467 74 ntBASIC30.11■■■□□ 2.41
Vmn1r55E9Q8I6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vmn1r55E9Q8I6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
Vmn1r55E9Q8I6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Vmn1r55E9Q8I6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Vmn1r55E9Q8I6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.94■■■□□ 2.38
Vmn1r55E9Q8I6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.94■■■□□ 2.38
Vmn1r55E9Q8I6 Gm25262-201ENSMUST00000174934 133 ntBASIC29.76■■■□□ 2.35
Vmn1r55E9Q8I6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Vmn1r55E9Q8I6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.66■■■□□ 2.34
Vmn1r55E9Q8I6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.61■■■□□ 2.33
Vmn1r55E9Q8I6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Vmn1r55E9Q8I6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Vmn1r55E9Q8I6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Vmn1r55E9Q8I6 Rab21-202ENSMUST00000218831 843 ntBASIC29.58■■■□□ 2.33
Vmn1r55E9Q8I6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.5■■■□□ 2.31
Vmn1r55E9Q8I6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Vmn1r55E9Q8I6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Vmn1r55E9Q8I6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.36■■■□□ 2.29
Vmn1r55E9Q8I6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Vmn1r55E9Q8I6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.32■■■□□ 2.28
Vmn1r55E9Q8I6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Vmn1r55E9Q8I6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.23■■■□□ 2.27
Vmn1r55E9Q8I6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Vmn1r55E9Q8I6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.17■■■□□ 2.26
Vmn1r55E9Q8I6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Vmn1r55E9Q8I6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Vmn1r55E9Q8I6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Vmn1r55E9Q8I6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Vmn1r55E9Q8I6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Vmn1r55E9Q8I6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Vmn1r55E9Q8I6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.11■■■□□ 2.25
Vmn1r55E9Q8I6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Vmn1r55E9Q8I6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Vmn1r55E9Q8I6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Vmn1r55E9Q8I6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Vmn1r55E9Q8I6 Gm26115-201ENSMUST00000175605 87 ntBASIC29.03■■■□□ 2.24
Vmn1r55E9Q8I6 Gm10524-201ENSMUST00000181931 1893 ntBASIC29■■■□□ 2.23
Vmn1r55E9Q8I6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Vmn1r55E9Q8I6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Vmn1r55E9Q8I6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Vmn1r55E9Q8I6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Vmn1r55E9Q8I6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Vmn1r55E9Q8I6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Vmn1r55E9Q8I6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.84■■■□□ 2.21
Vmn1r55E9Q8I6 Gm8109-201ENSMUST00000194076 746 ntBASIC28.83■■■□□ 2.21
Vmn1r55E9Q8I6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Vmn1r55E9Q8I6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.83■■■□□ 2.21
Vmn1r55E9Q8I6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Vmn1r55E9Q8I6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Vmn1r55E9Q8I6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.75■■■□□ 2.19
Vmn1r55E9Q8I6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.71■■■□□ 2.19
Vmn1r55E9Q8I6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vmn1r55E9Q8I6 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.68■■■□□ 2.18
Vmn1r55E9Q8I6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Vmn1r55E9Q8I6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.66■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms