RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ELAVL2Q12926 359 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 SGO1Q5FBB7 561 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 SLC2A7Q6PXP3 512 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 FNDC5Q8NAU1 212 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 SOX17Q9H6I2 414 aaPredicted RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 FARSBQ9NSD9 589 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 RSL1D1O76021 490 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 CYBBP04839 570 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 C8BP07358 591 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 CAPN1P07384 714 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 GNAO1P09471 354 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 HSPA7P48741 367 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 SAMD4BQ5PRF9 694 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 LRRC58Q96CX6 371 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 TSEN34Q9BSV6 310 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 PAIP1Q9H074 479 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 SLC52A3Q9NQ40 469 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 SDR39U1Q9NRG7 319 aaPredicted RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 TBC1D23Q9NUY8 699 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 EBF1Q9UH73 591 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 BCAP29Q9UHQ4 241 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 MBD1Q9UIS9 605 aaPredicted RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 C1orf232A0A0U1RR37 186 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 PRAMEF1O95521 474 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 CAPNS1P04632 268 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 HOXD10P28358 340 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 CLCN7P51798 805 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 NFYCQ13952 458 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 IKBKEQ14164 716 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 Q6ZSR9 355 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 SERPINA9Q86WD7 417 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 CLVS1Q8IUQ0 354 aaPredicted RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 ADGRG2Q8IZP9 1017 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 ZNF296Q8WUU4 475 aaPredicted RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 DLG3Q92796 817 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 GPATCH1Q9BRR8 931 aaKnown RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 ADGRE3Q9BY15 652 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 IL17CQ9P0M4 197 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 AFF4Q9UHB7 1163 aaKnown RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 MYRFQ9Y2G1 1151 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 COQ6Q9Y2Z9 468 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 EYSQ5T1H1 3165 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 TCRBV3S1A0A5B6 114 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 FUOMA2VDF0 154 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 HTR3EA5X5Y0 456 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 H3BNH8 94 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 ACADVLP49748 655 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 CDH15P55291 814 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 DEFB103AP81534 67 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 SELPLGQ14242 412 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 PHKG1Q16816 387 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 DEFB115Q30KQ5 88 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 IL27RAQ6UWB1 636 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 KIAA2013Q8IYS2 634 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 PLD4Q96BZ4 506 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 MTFMTQ96DP5 389 aaKnown RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 ELOVL2Q9NXB9 296 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 FAM8A1Q9UBU6 413 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 GAPDHSO14556 408 aaPredicted RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 INPP4BO15327 924 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 SYNCRIPO60506 623 aaKnown RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 COL6A1P12109 1028 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 TTPAP49638 278 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 TXNL4AP83876 142 aaKnown RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 TBCELQ5QJ74 424 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 KRT80Q6KB66 452 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 BLOC1S3Q6QNY0 202 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 GPRIN3Q6ZVF9 776 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 SFRP1Q8N474 314 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 PPM1MQ96MI6 270 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 SEPHS2Q99611 448 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 MRPL9Q9BYD2 267 aaKnown RBP14.56□□□□□ -0.08
DDX55-209ENST00000542286 ASB8Q9H765 288 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 OLAHQ9NV23 265 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 SLC30A1Q9Y6M5 507 aa14.56□□□□□ -0.08
DDX55-209ENST00000542286 CHD9Q3L8U1 2897 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 SEC24DO94855 1032 aaPredicted RBP14.55□□□□□ -0.08
DDX55-209ENST00000542286 STAMBPO95630 424 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 ESRRBO95718 433 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 CD70P32970 193 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 GJA8P48165 433 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 RXRGP48443 463 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 SPIDRQ14159 915 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 PTRHD1Q6GMV3 140 aaKnown RBP14.55□□□□□ -0.08
DDX55-209ENST00000542286 DNAJC14Q6Y2X3 702 aaPredicted RBP14.55□□□□□ -0.08
DDX55-209ENST00000542286 FRA10AC1Q70Z53 315 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 BBS7Q8IWZ6 715 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 PCYOX1LQ8NBM8 494 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 METTL6Q8TCB7 284 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 PEX13Q92968 403 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 RMND5BQ96G75 393 aaPredicted RBP14.55□□□□□ -0.08
DDX55-209ENST00000542286 TMEM79Q9BSE2 394 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 PKP3Q9Y446 797 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 TRIM17Q9Y577 477 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 ARPC2O15144 300 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 GREM1O60565 184 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 ABLIM3O94929 683 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 OCM2P0CE71 109 aa14.55□□□□□ -0.08
DDX55-209ENST00000542286 OCMP0CE72 109 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms