RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TFEBP19484 476 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 MCM7P33993 719 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 DPP6P42658 865 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 GPR12P47775 334 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 LIG4P49917 911 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 HSD17B4P51659 736 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 STAT2P52630 851 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 ARSFP54793 590 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 SLC12A2P55011 1212 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 PLP2Q04941 152 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 BAATQ14032 418 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 PCGF3Q3KNV8 242 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 C9orf152Q5JTZ5 239 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 C1QTNF12Q5T7M4 302 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 GKAP1Q5VSY0 366 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 LRIG3Q6UXM1 1119 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 C15orf39Q6ZRI6 1047 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 LCNL1Q6ZST4 164 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 CCDC186Q7Z3E2 898 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 WDR5BQ86VZ2 330 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 RFX6Q8HWS3 928 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 RHPN2Q8IUC4 686 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 FAM185AQ8N0U4 392 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 EXD3Q8N9H8 876 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 MCUQ8NE86 351 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 APPL2Q8NEU8 664 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 GABPB2Q8TAK5 448 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 BCAS4Q8TDM0 211 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 CACTINQ8WUQ7 758 aaKnown RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 ADAMTS14Q8WXS8 1223 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 SMG7Q92540 1137 aaKnown RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 FGF14Q92915 247 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 ARHGEF26Q96DR7 871 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 MOCOSQ96EN8 888 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 MMABQ96EY8 250 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 WBP1Q96G27 269 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 RAB3IPQ96QF0 476 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 ZNF347Q96SE7 839 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 KXD1Q9BQD3 176 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 SCPEP1Q9HB40 452 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 WDR6Q9NNW5 1121 aaKnown RBP4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 SMPD4Q9NXE4 827 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 MKLN1Q9UL63 735 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 TSC22D4Q9Y3Q8 395 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
HMGB1P23-201ENST00000518743 NRCAMQ92823 1304 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 THADAQ6YHU6 1953 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 A0A096LPK6 155 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 BCLAF3A2AJT9 711 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 ANHXE9PGG2 379 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 EBAG9O00559 213 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 CTDSP2O14595 271 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 LIASO43766 372 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 DAB1O75553 588 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MTA2O94776 668 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 HSPA4LO95757 839 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 BAG2O95816 211 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 DDAH2O95865 285 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MT-CYBP00156 380 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 GH1P01241 217 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 AFPP02771 609 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 SRPRAP08240 638 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 CD63P08962 238 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 TNFRSF1AP19438 455 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 KLRC2P26717 231 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 EPHB2P29323 1055 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 PIK3CAP42336 1068 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 CLCNKBP51801 687 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 RAD23AP54725 363 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MFAP4P55083 255 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 CYP4F2P78329 520 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 IRX4P78413 519 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 SEMG2Q02383 582 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 TFCP2Q12800 502 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 IKQ13123 557 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 SCARB2Q14108 478 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 IRF3Q14653 427 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 KPNB1Q14974 876 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 TRIP6Q15654 476 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 UBAP2Q5T6F2 1119 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 PARM1Q6UWI2 310 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 NAPRTQ6XQN6 538 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MTSS1LQ765P7 747 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 CYB5R4Q7L1T6 521 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 G2E3Q7L622 706 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MRGPREQ86SM8 312 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 TBC1D26Q86UD7 250 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MARCH9Q86YJ5 346 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 RNF168Q8IYW5 571 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 SPEM1Q8N4L4 309 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 NSMCE1Q8WV22 266 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 PIGKQ92643 395 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZNF558Q96NG5 402 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 FIZ1Q96SL8 496 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 GTPBP2Q9BX10 602 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms