RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 INTS12Q96CB8 462 aaKnown RBP3.68□□□□□ -1.82
DHFR-207ENST00000513314 MMABQ96EY8 250 aaPredicted RBP3.68□□□□□ -1.82
DHFR-207ENST00000513314 RHNO1Q9BSD3 238 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 SYT11Q9BT88 431 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 SH2D4AQ9H788 454 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 RPS10P5Q9NQ39 176 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 PTTG2Q9NZH5 202 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 EHD2Q9NZN4 543 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 DNAJB4Q9UDY4 337 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 CNOT8Q9UFF9 292 aaKnown RBP3.68□□□□□ -1.82
DHFR-207ENST00000513314 KCNE2Q9Y6J6 123 aa3.68□□□□□ -1.82
DHFR-207ENST00000513314 ATP2A1O14983 1001 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 BAIAP3O94812 1187 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 SCGB1D1O95968 90 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 PSMA4P25789 261 aaKnown RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 SETQ01105 290 aaPredicted RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 PPARDQ03181 441 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 ZNF239Q16600 458 aaKnown RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 TMEM154Q6P9G4 183 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 TRIM65Q6PJ69 517 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 TMTC3Q6ZXV5 915 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 SDCCAG8Q86SQ7 713 aaPredicted RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 TEX11Q8IYF3 940 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 C1orf52Q8N6N3 182 aaKnown RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 NCAPGQ9BPX3 1015 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 STRA6Q9BX79 667 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 PIGMQ9H3S5 423 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 EIF2B3Q9NR50 452 aaKnown RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 CWC15Q9P013 229 aaKnown RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 TMEM181Q9P2C4 612 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 KLHL8Q9P2G9 620 aaPredicted RBP3.67□□□□□ -1.82
DHFR-207ENST00000513314 KDM3AQ9Y4C1 1321 aa3.67□□□□□ -1.82
DHFR-207ENST00000513314 NPIPB15A6NHN6 443 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 PRR32B1ATL7 298 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 HMGB1P1B2RPK0 211 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 NDUFS3O75489 264 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 RNASEH2AO75792 299 aaKnown RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 NADKO95544 446 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 ICAM1P05362 532 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 HMBSP08397 361 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 ANXA7P20073 488 aaKnown RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 PIK3CAP42336 1068 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 F2RL1P55085 397 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 MRPS34P82930 218 aaKnown RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 TMEM115Q12893 351 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 LRMPQ12912 555 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 MAMLD1Q13495 774 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 GTDC1Q4AE62 458 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 BHLHB9Q6PI77 547 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 ISCA2Q86U28 154 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 PTOV1Q86YD1 416 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 RASGEF1CQ8N431 466 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 ZNF611Q8N823 705 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 OR2T12Q8NG77 320 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 GRHL3Q8TE85 626 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 SMPDL3BQ92485 455 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 MOAP1Q96BY2 351 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 IWS1Q96ST2 819 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 RTP3Q9BQQ7 232 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 RANGRFQ9HD47 186 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 ZNF71Q9NQZ8 489 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 COQ3Q9NZJ6 369 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 FBXW11Q9UKB1 542 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 TMEM184BQ9Y519 407 aaPredicted RBP3.66□□□□□ -1.82
DHFR-207ENST00000513314 ITIH6Q6UXX5 1313 aa3.66□□□□□ -1.82
DHFR-207ENST00000513314 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 A0A087X0M5 115 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 FAM237BA0A1B0GVD1 139 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 A0A1B0GX30 115 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 AP3D1O14617 1153 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 GPR137BO60478 399 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 PAGE4O60829 102 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 ZBED4O75132 1171 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 DAB1O75553 588 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 SLC25A12O75746 678 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 CSPG5O95196 566 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 ACADMP11310 421 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 EPHA2P29317 976 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 PBX3P40426 434 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 WNT5AP41221 380 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 MMP15P51511 669 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 SLC8A3P57103 927 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 CD81P60033 236 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 SNRPD1P62314 119 aaKnown RBP3.65□□□□□ -1.83
DHFR-207ENST00000513314 CSTF3Q12996 717 aaKnown RBP3.65□□□□□ -1.83
DHFR-207ENST00000513314 RALBP1Q15311 655 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 MED22Q15528 200 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 ZSCAN23Q3MJ62 389 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 ZNF613Q6PF04 617 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 FASTKD5Q7L8L6 764 aaKnown RBP3.65□□□□□ -1.83
DHFR-207ENST00000513314 SCML4Q8N228 414 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 ZNF614Q8N883 585 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 TMEM116Q8NCL8 245 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 TMEM143Q96AN5 459 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 GIMAP5Q96F15 307 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 MAP7D2Q96T17 732 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 MTMR6Q9Y217 621 aa3.65□□□□□ -1.83
DHFR-207ENST00000513314 TDRD9Q8NDG6 1382 aaKnown RBP3.64□□□□□ -1.83
DHFR-207ENST00000513314 PGPEP1LA6NFU8 196 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms