RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TMPRSS13Q9BYE2 586 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 CARD9Q9H257 536 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 HSD3B7Q9H2F3 369 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 MTG2Q9H4K7 406 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 SLITRK6Q9H5Y7 841 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 PARVBQ9HBI1 364 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 NRIP3Q9NQ35 241 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 PFDN4Q9NQP4 134 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 ASAH2Q9NR71 780 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 ARHGEF3Q9NR81 526 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 CISHQ9NSE2 258 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 ATAD3AQ9NVI7 634 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 KCNK4Q9NYG8 393 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 TAS2R3Q9NYW6 316 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 CTTNBP2NLQ9P2B4 639 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 ZNHIT2Q9UHR6 403 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 CA14Q9ULX7 337 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 COQ4Q9Y3A0 265 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 ASB1Q9Y576 335 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 NOTCH4Q99466 2003 aa4.55□□□□□ -1.68
SF3B1-202ENST00000409915 MTCL1Q9Y4B5 1905 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 NCOR1O75376 2440 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 hCG_1809904A0A1W2PP81 198 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 A0A1W2PPE2 198 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 A0A1W2PR64 198 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GMNCA6NCL1 334 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SLC38A8A6NNN8 435 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 C22orf46C9J442 243 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PEX12O00623 359 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 MCF2LO15068 1137 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SCAMP1O15126 338 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 NARSO43776 548 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CBFA2T3O75081 653 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 DEAF1O75398 565 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 MATN4O95460 622 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PRAMEF12O95522 483 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 C1RP00736 705 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SYPP08247 313 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PABPC4LP0CB38 370 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GSTT2P0CG29 244 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GSTT2BP0CG30 244 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GZMAP12544 262 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 RARGP13631 454 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CD19P15391 556 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 NQO1P15559 274 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 HMGA1P17096 107 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ACO1P21399 889 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CD9P21926 228 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 FUT4P22083 530 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 IL10P22301 178 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CPT2P23786 658 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 FCARP24071 287 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PTAFRP25105 342 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PON1P27169 355 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ANXA13P27216 316 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SERPINA4P29622 427 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CD68P34810 354 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 BSGP35613 385 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 SKIV2L2P42285 1042 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TUFMP49411 452 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 COPB1P53618 953 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 RAD23BP54727 409 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 MAP3K7CLP57077 242 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 C21orf58P58505 322 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 RPL10AP62906 217 aaKnown RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 DMPKQ09013 629 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 MGAT5Q09328 741 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PTP4A2Q12974 167 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PDCLQ13371 301 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 HTR4Q13639 388 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 E2F2Q14209 437 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 HABP2Q14520 560 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 IRF3Q14653 427 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ACAP1Q15027 740 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 KRT31Q15323 416 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 EXOC3L4Q17RC7 722 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GOLGA7BQ2TAP0 167 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CNPY1Q3B7I2 92 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CFAP221Q4G0U5 840 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TTMPQ5BVD1 217 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TOR1AIP1Q5JTV8 583 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 C9orf152Q5JTZ5 239 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CYP4A22Q5TCH4 519 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 DCAF12L1Q5VU92 463 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GRAMD4Q6IC98 578 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 FDX2Q6P4F2 183 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TMEM270Q6UE05 265 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 FAM180AQ6UWF9 173 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PARM1Q6UWI2 310 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ARHGEF18Q6ZSZ5 1173 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 CLEC20AQ6ZU45 233 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 OTOAQ7RTW8 1153 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-202ENST00000409915 TMEM150AQ86TG1 271 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 ITIH5Q86UX2 942 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 MON1AQ86VX9 555 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 KRT73Q86Y46 540 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 DNAAF5Q86Y56 855 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 WFDC8Q8IUA0 241 aa4.54□□□□□ -1.68
SF3B1-202ENST00000409915 GLB1L2Q8IW92 636 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms