RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ALPIP09923 528 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 MC4RP32245 332 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 NUDT6P53370 316 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 SULT1C3Q6IMI6 304 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 TIGD7Q6NT04 549 aaPredicted RBP16.52■□□□□ 0.24
SIPA1-201ENST00000394224 FAM151BQ6UXP7 276 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 AQP12AQ8IXF9 295 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 CLIP4Q8N3C7 705 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 CAPSLQ8WWF8 208 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 ACTR8Q9H981 624 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 ABCC13Q9NSE7 274 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 LEF1Q9UJU2 399 aaPredicted RBP16.52■□□□□ 0.24
SIPA1-201ENST00000394224 PKP3Q9Y446 797 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 GMEB1Q9Y692 573 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 SPEGQ15772 3267 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 PORP16435 677 aaPredicted RBP16.52■□□□□ 0.24
SIPA1-201ENST00000394224 MLLT6P55198 1093 aaPredicted RBP16.52■□□□□ 0.24
SIPA1-201ENST00000394224 DAB2P98082 770 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 MS4A13Q5J8X5 152 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 TMEM126BQ8IUX1 230 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 CNTN4Q8IWV2 1026 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 TBC1D21Q8IYX1 336 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 FBXO32Q969P5 355 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 ULK4Q96C45 1275 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 SNX8Q9Y5X2 465 aa16.52■□□□□ 0.24
SIPA1-201ENST00000394224 CYP7B1O75881 506 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 CLPXO76031 633 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 KCNE1P15382 129 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 INTS6LQ5JSJ4 861 aaKnown RBP16.52■□□□□ 0.23
SIPA1-201ENST00000394224 AHSA2Q719I0 299 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 SPARTQ8N0X7 666 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 GPC2Q8N158 579 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 C10orf111Q8N326 155 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 OR52J3Q8NH60 311 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 MCOLN3Q8TDD5 553 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 KCNN1Q92952 543 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 FEM1CQ96JP0 617 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 BIRC8Q96P09 236 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 NEURL2Q9BR09 285 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 AMBRA1Q9C0C7 1298 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 SLC6A13Q9NSD5 602 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 MTRRQ9UBK8 725 aa16.52■□□□□ 0.23
SIPA1-201ENST00000394224 CNOT11Q9UKZ1 510 aaKnown RBP16.52■□□□□ 0.23
SIPA1-201ENST00000394224 TBX1O43435 398 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 FAM163BP0C2L3 166 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 MAPKAPK3Q16644 382 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 CYP20A1Q6UW02 462 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 NEK10Q6ZWH5 1172 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 FUBP1Q96AE4 644 aaKnown RBP16.51■□□□□ 0.23
SIPA1-201ENST00000394224 IMP4Q96G21 291 aaKnown RBP16.51■□□□□ 0.23
SIPA1-201ENST00000394224 SIAEQ9HAT2 523 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 NTN4Q9HB63 628 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 GKN1Q9NS71 199 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 CXCL11O14625 94 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 CBFA2T3O75081 653 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 SERPINA1P01009 418 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 MMP2P08253 660 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 SERPINF2P08697 491 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 POU2F1P14859 743 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
SIPA1-201ENST00000394224 GTF2E2P29084 291 aaKnown RBP16.51■□□□□ 0.23
SIPA1-201ENST00000394224 HK3P52790 923 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 PPIL2Q13356 520 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 DAG1Q14118 895 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 RGMBQ6NW40 437 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 FAM117BQ6P1L5 589 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 UBE2J2Q8N2K1 259 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 ZNF540Q8NDQ6 660 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 OR4F6Q8NGB9 312 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 SLC47A1Q96FL8 570 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 IPPKQ9H8X2 491 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 MARCH2Q9P0N8 246 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 PSME2Q9UL46 239 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 LCTP09848 1927 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 PSMD11O00231 422 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 MGEA5O60502 916 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 DNTTP04053 509 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 GSTT2P0CG29 244 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 GSTT2BP0CG30 244 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 SCNN1AP37088 669 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 TAF10Q12962 218 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 BNIP2Q12982 314 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 RAPSNQ13702 412 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 C11orf74Q86VG3 221 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 OSCP1Q8WVF1 389 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 NODALQ96S42 347 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 DPH2Q9BQC3 489 aaPredicted RBP16.51■□□□□ 0.23
SIPA1-201ENST00000394224 EBPLQ9BY08 206 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 RNF167Q9H6Y7 350 aa16.51■□□□□ 0.23
SIPA1-201ENST00000394224 STX7O15400 261 aaKnown RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 SERPINB7O75635 380 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 HPCAL1P37235 193 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 AASDHQ4L235 1098 aaPredicted RBP16.5■□□□□ 0.23
SIPA1-201ENST00000394224 LCN8Q6JVE9 175 aa16.5■□□□□ 0.23
SIPA1-201ENST00000394224 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms