RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ZNF395Q9H8N7 513 aaPredicted RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM98Q9Y2Y6 226 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TTC34A8MYJ7 566 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 AXIN1O15169 862 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TGDSO95455 350 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 ATP1B2P14415 290 aaPredicted RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 PRKCHP24723 683 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 RPL3P39023 403 aaKnown RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC34A1Q06495 639 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 LSM12Q3MHD2 195 aaKnown RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 RALGPS1Q5JS13 557 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 ZCCHC8Q6NZY4 707 aaKnown RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 KRT73Q86Y46 540 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 FITM2Q8N6M3 262 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 PGAP3Q96FM1 320 aaPredicted RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 GPR22Q99680 433 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 FAM189A1O60320 539 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 FYNP06241 537 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 UROSP10746 265 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RUNX3Q13761 415 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 VPS26BQ4G0F5 336 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 MED27Q6P2C8 311 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF549Q6P9A3 640 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF783Q6ZMS7 281 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ARMCX6Q7L4S7 300 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ZDHHC14Q8IZN3 488 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 DSELQ8IZU8 1212 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 DEFB119Q8N690 84 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RAD21L1Q9H4I0 556 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 MTG2Q9H4K7 406 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RPL26L1Q9UNX3 145 aaKnown RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 SSC5DA1L4H1 1573 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ANXA4P09525 319 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 NR2F1P10589 423 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 HNF1BP35680 557 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 KIR3DL1P43629 444 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 HSPA13P48723 471 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 BEND5Q7L4P6 421 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 DHDDSQ86SQ9 333 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 NELL1Q92832 810 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 LENG8Q96PV6 779 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ARMC7Q9H6L4 198 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 DNAJC28Q9NX36 388 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 GALPQ9UBC7 116 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ANAPC2Q9UJX6 822 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 KCNK6Q9Y257 313 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 OR10H1Q9Y4A9 318 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 CDK5RAP2Q96SN8 1893 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 PI15O43692 258 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 SOCS5O75159 536 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ECI2O75521 394 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RPS7P62081 194 aaKnown RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 EOGTQ5NDL2 527 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 INTS11Q5TA45 600 aaKnown RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 EID3Q8N140 333 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC38A3Q99624 504 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 SRMSQ9H3Y6 488 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 KRT84Q9NSB2 600 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 EVA1BQ9NVM1 165 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 A0A1W2PP55 124 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 K7EPI3 171 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 NDUFB5O43674 189 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RECQL5O94762 991 aaPredicted RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 ETV3P41162 512 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 PGGT1BP53609 377 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 C2orf80Q0P641 193 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 IRGCQ6NXR0 463 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 FAM129CQ86XR2 697 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 PNPT1Q8TCS8 783 aaKnown RBP12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC46A2Q9BY10 475 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 RNF38Q9H0F5 515 aa12.92□□□□□ -0.34
PTPRN2-202ENST00000389416 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ATF6P18850 670 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 GDF5P43026 501 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 PLA2G16P53816 162 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ELF3P78545 371 aaPredicted RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 MGAT3Q09327 533 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF805Q5CZA5 627 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 LHX8Q68G74 356 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CAPRIN2Q6IMN6 1127 aaKnown RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM26Q6ZUK4 368 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 LRRTM4Q86VH4 590 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 FAM46DQ8NEK8 389 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CEP295NLQ96MC4 621 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ROGDIQ9GZN7 287 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 NSUN3Q9H649 340 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms