RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 THAP6Q8TBB0 222 aa16.24■□□□□ 0.19
PTCH1-201ENST00000331920 CCDC107Q8WV48 283 aa16.24■□□□□ 0.19
PTCH1-201ENST00000331920 ZBTB45Q96K62 511 aaPredicted RBP16.24■□□□□ 0.19
PTCH1-201ENST00000331920 CHST7Q9NS84 486 aa16.24■□□□□ 0.19
PTCH1-201ENST00000331920 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
PTCH1-201ENST00000331920 CLDN25C9JDP6 229 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 CCRL2O00421 344 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 TARBP2Q15633 366 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 POGLUT1Q8NBL1 392 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 MTMR8Q96EF0 704 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 NDRG2Q9UN36 371 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 CCL16O15467 120 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 VARSP26640 1264 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 CCL23P55773 120 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 SSTP61278 116 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 TROAPQ12815 778 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 SLITRK4Q8IW52 837 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 GRPEL2Q8TAA5 225 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 LGMNQ99538 433 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 NOP16Q9Y3C1 178 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 ATG13O75143 517 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 HCKP08631 526 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 ILF2Q12905 390 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 DCBLD1Q8N8Z6 715 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 PROKR2Q8NFJ6 384 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 FEM1AQ9BSK4 669 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 TMED9Q9BVK6 235 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 FADS3Q9Y5Q0 445 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF705EA8MWA4 302 aaPredicted RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 ENPP3O14638 875 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 SLC16A8O95907 504 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 FNTBP49356 437 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 RASGRP3Q8IV61 690 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 COX18Q8N8Q8 333 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 PTPRJQ12913 1337 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 CYP3A4P08684 503 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 GOT1P17174 413 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 RAB4BP61018 213 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 PHC1P78364 1004 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 CD47Q08722 323 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 POC1BQ8TC44 478 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 DNAJC18Q9H819 358 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 PNPOQ9NVS9 261 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 TAS2R7Q9NYW3 318 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 A8MUA0 341 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 AXIN1O15169 862 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 NOBOXO60393 691 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 SERPINA6P08185 405 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 CPN2P22792 545 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 ADORA2AP29274 412 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 RBM39Q14498 530 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 GLYATQ6IB77 296 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 OR8S1Q8NH09 359 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 LRTM1Q9HBL6 345 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 ILF3Q12906 894 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 GRIK2Q13002 908 aa16.23■□□□□ 0.19
PTCH1-201ENST00000331920 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 DNAJB7Q7Z6W7 309 aaPredicted RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 NXF3Q9H4D5 531 aaKnown RBP16.23■□□□□ 0.19
PTCH1-201ENST00000331920 PGLSO95336 258 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 CDH12P55289 794 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 TREML1Q86YW5 311 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 LPPQ93052 612 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 TMEM121BQ9BXQ6 578 aaPredicted RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 PLK2Q9NYY3 685 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 MAGEL2Q9UJ55 1249 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 AGO1Q9UL18 857 aaKnown RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 EDARQ9UNE0 448 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 C2orf92A0A1B0GVN3 265 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 HHIPL2Q6UWX4 724 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 GSTCDQ8NEC7 633 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 SCNN1AP37088 669 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 GANABQ14697 944 aaKnown RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 LIX1Q8N485 282 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 NFASCO94856 1347 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 APOC4-APOC2K7ER74 178 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 SASH3O75995 380 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 APOC2P02655 101 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 MAGEA3P43357 314 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 RORCP51449 518 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 PRR5P85299 388 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 LAS2Q8IYD9 372 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 UNC5BQ8IZJ1 945 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 GABBR2O75899 941 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 CHKAP35790 457 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 SLC26A5P58743 744 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 PCBP2Q15366 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 SPATC1Q76KD6 591 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 AUTS2Q8WXX7 1259 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 WDR77Q9BQA1 342 aaPredicted RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 HMX1Q9NP08 348 aaPredicted RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 CYTH4Q9UIA0 394 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 KHNYNO15037 678 aaKnown RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 PPIBP23284 216 aaKnown RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF557Q8N988 423 aaPredicted RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 SLAIN1Q8ND83 568 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms