RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TLR1Q15399 786 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 NODALQ96S42 347 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 GLOD4Q9HC38 313 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 NR2E1Q9Y466 385 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 NDUFV1P49821 464 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 ARSHQ5FYA8 562 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 SNX20Q7Z614 316 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 PCDHGA10Q9Y5H3 936 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 MADDQ8WXG6 1647 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CPNE3O75131 537 aaKnown RBP16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 C22orf31O95567 290 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 VLDLRP98155 873 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CHAF1BQ13112 559 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 IKBKEQ14164 716 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 SPATA19Q7Z5L4 167 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 C17orf50Q8WW18 174 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CST11Q9H112 138 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 PRDM8Q9NQV8 689 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 MGAT4AQ9UM21 535 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 FKBP7Q9Y680 259 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 C5orf51A6NDU8 294 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 TGFB1I1O43294 461 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 KIR3DL1P43629 444 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 DRG2P55039 364 aaKnown RBP16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CLCQ05315 142 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 TTTY10Q9BZA0 68 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 C3orf14Q9HBI5 128 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 FADS2P1A8MWK0 482 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 SLC30A4O14863 429 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 SPATA31C1P0DKV0 1188 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 GRK5P34947 590 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 MINDY4Q4G0A6 757 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 KIAA1161Q6NSJ0 714 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 BEND5Q7L4P6 421 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 C17orf64Q86WR6 236 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 SHC3Q92529 594 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 INPP4AQ96PE3 977 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 BEX2Q9BXY8 128 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 TMEM168Q9H0V1 697 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 RHOJQ9H4E5 214 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 BEX1Q9HBH7 125 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 RAI2Q9Y5P3 530 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 OR1F1O43749 312 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 CABYRO75952 493 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 MAT2AP31153 395 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 CYP2C18P33260 490 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 PDE12Q6L8Q7 609 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 DUSP16Q9BY84 665 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 B3GNT4Q9C0J1 378 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 RPP40O75818 363 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 AVPR1BP47901 424 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 RGS8P57771 180 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 DCDC1P59894 354 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 ZNF234Q14588 700 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 SLC8B1Q6J4K2 584 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 PHC2Q8IXK0 858 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 GPN3Q9UHW5 284 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 TMCO1Q9UM00 188 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 DNAJA2O60884 412 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 GDF10P55107 478 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 BNIP1Q12981 228 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 UAP1L1Q3KQV9 507 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 SH3PXD2AQ5TCZ1 1133 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 RPL10LQ96L21 214 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 ZNF350Q9GZX5 532 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 CCNE2O96020 404 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 GOT2P00505 430 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 CES1P23141 567 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 HMBOX1Q6NT76 420 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 TNFAIP8L2Q6P589 184 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 GET4Q7L5D6 327 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 ATAD1Q8NBU5 361 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 FBXO15Q8NCQ5 510 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 SLC39A3Q9BRY0 314 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 NECTIN3Q9NQS3 549 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 ARL5AQ9Y689 179 aa16.62■□□□□ 0.25
TSPAN3-201ENST00000267970 URADA6NGE7 173 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 OR1D2P34982 312 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 PPM1AP35813 382 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 BNC1Q01954 994 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 MFSD14AQ96MC6 490 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 TSPAN18Q96SJ8 248 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 ZNF358Q9NW07 568 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 PARPBPQ9NWS1 579 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 DNAJC28Q9NX36 388 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 RAB26Q9ULW5 256 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 M0R036 132 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 WFS1O76024 890 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 ATP6V0D1P61421 351 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 DGLUCYQ7Z3D6 616 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 DTX3Q8N9I9 347 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 DENND6BQ8NEG7 585 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 SMG7Q92540 1137 aaKnown RBP16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 SMCO3A2RU48 225 aa16.61■□□□□ 0.25
TSPAN3-201ENST00000267970 AURKAO14965 403 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms