RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MVB12BQ9H7P6 319 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF302Q9NR11 478 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 HSF4Q9ULV5 492 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 NAP1L2Q9ULW6 460 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 PCDHA7Q9UN72 937 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 TRPV2Q9Y5S1 764 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 VCANP13611 3396 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ARHGAP10A1A4S6 786 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 LINC01553A4QN01 128 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM90A8PA6NJQ4 464 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 C5orf67F2Z3F1 127 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 M0QZ92 97 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MSH4O15457 936 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 HOXC11O43248 304 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 SMAD6O43541 496 aaKnown RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 LIASO43766 372 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC25A17O43808 307 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 CEP104O60308 925 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 DKC1O60832 514 aaKnown RBP eCLIP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 GUCY1B2O75343 617 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 CTDNEP1O95476 244 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 C22orf31O95567 290 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 RB1P06400 928 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 LINC00271P0C7V0 271 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM90A13PP0C7W8 464 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM90A24PP0C7X0 464 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FDPSP14324 419 aaKnown RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 CTPS1P17812 591 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MARK3P27448 753 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 HOXA11P31270 313 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MLH1P40692 756 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 GPD2P43304 727 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 THBS3P49746 956 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 CRYBB1P53674 252 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 NANOS2P60321 138 aaKnown RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 VAMP2P63027 116 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ABATP80404 500 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 Q0VFX4 171 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MAPK7Q13164 816 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 TRPC3Q13507 836 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 NONOQ15233 471 aaKnown RBP eCLIP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF284Q2VY69 593 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 EDRF1Q3B7T1 1238 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FSCBQ5H9T9 825 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 TRILQ7L0X0 811 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MON1BQ7L1V2 547 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 PALB2Q86YC2 1186 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MYOCDQ8IZQ8 938 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MCPH1Q8NEM0 835 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ETNPPLQ8TBG4 499 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 TBCKQ8TEA7 893 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 GDPD5Q8WTR4 605 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 GTF3C6Q969F1 213 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF689Q96CS4 500 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 HVCN1Q96D96 273 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ELP4Q96EB1 424 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM20AQ96MK3 541 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 NTPCRQ9BSD7 190 aaKnown RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 TEKT3Q9BXF9 490 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 DCLK3Q9C098 648 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 NPFFR1Q9GZQ6 430 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 KCNMB3Q9NPA1 279 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 NRBP2Q9NSY0 501 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 IFT80Q9P2H3 777 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 ORC3Q9UBD5 711 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 FZD10Q9ULW2 581 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 MTCH2Q9Y6C9 303 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 CITO14578 2027 aa3.73□□□□□ -1.81
CKS1BP3-201ENST00000600888 CACNA1AO00555 2505 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 IGKV6-21A0A0C4DH24 114 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 GOLGA6L10A0A0M3HER8 536 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 EPOPA6NHQ4 379 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 TEX22C9J3V5 150 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 DDX39AO00148 427 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 STBD1O95210 358 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 TDP2O95551 362 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MMP1P03956 469 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 STAG3L1P0CL83 205 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 GHRP10912 638 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 TMOD1P28289 359 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 DCTDP32321 178 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 TTKP33981 857 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 BLKP51451 505 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 PSMC5P62195 406 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 PPP2R5CQ13362 524 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 ORC2Q13416 577 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 TDGQ13569 410 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 HNF4GQ14541 408 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 EPC2Q52LR7 807 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 XKR3Q5GH77 459 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MOB3CQ70IA8 216 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MON1AQ86VX9 555 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 C4orf19Q8IY42 314 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 TNIP2Q8NFZ5 429 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 PPM1EQ8WY54 764 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 ARNTL2Q8WYA1 636 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms