RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SEMA4BQ9NPR2 832 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-205ENST00000539661 PAK1IP1Q9NWT1 392 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-205ENST00000539661 NYNRINQ9P2P1 1898 aaKnown RBP17.4■□□□□ 0.38
RAB40C-205ENST00000539661 STX16O14662 325 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 GPR32O75388 356 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 CNTN5O94779 1100 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 ACVR1Q04771 509 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 EIF4EBP2Q13542 120 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-205ENST00000539661 DSG4Q86SJ6 1040 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 P2RY8Q86VZ1 359 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 NDNFQ8TB73 568 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 GIPC2Q8TF65 315 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 FATE1Q969F0 183 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 CCDC90BQ9GZT6 254 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 INTS6Q9UL03 887 aaKnown RBP17.4■□□□□ 0.38
RAB40C-205ENST00000539661 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 TIMM22Q9Y584 194 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 A0A1B0GTL3 188 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 SUPT3HB4E1H0 165 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 NUAK1O60285 661 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 GLP2RO95838 553 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 HOXB6P17509 224 aaKnown RBP17.39■□□□□ 0.37
RAB40C-205ENST00000539661 LHX1P48742 406 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 PWP1Q13610 501 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 MRNIPQ6NTE8 343 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 SNX29P2Q8IUI4 249 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 SLC7A5P1Q8MH63 180 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 PNPLA1Q8N8W4 532 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 OR5K1Q8NHB7 308 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 RHOXF1Q8NHV9 184 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 PCED1BQ96HM7 432 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF300Q96RE9 604 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-205ENST00000539661 DERL2Q9GZP9 239 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 RNF112Q9ULX5 631 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 PMF1-BGLAPU3KQ54 211 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 SYCE1LA8MT33 242 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 PTGES3LE9PB15 166 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 RENBPP51606 427 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 CLPPQ16740 277 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-205ENST00000539661 C6orf136Q5SQH8 315 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 SYT6Q5T7P8 510 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-205ENST00000539661 TXNDC11Q6PKC3 985 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
RAB40C-205ENST00000539661 TMEM86AQ8N2M4 240 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 SMARCD1Q96GM5 515 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 REXO5Q96IC2 774 aaKnown RBP17.39■□□□□ 0.37
RAB40C-205ENST00000539661 ASPSCR1Q9BZE9 553 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 HEBP1Q9NRV9 189 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 TMEM30AQ9NV96 361 aa17.39■□□□□ 0.37
RAB40C-205ENST00000539661 TTC34A8MYJ7 566 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 NOBOXO60393 691 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ITGAMP11215 1152 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 DARSP14868 501 aaKnown RBP17.38■□□□□ 0.37
RAB40C-205ENST00000539661 CDK5R2Q13319 367 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 IL31Q6EBC2 164 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 TUBA3EQ6PEY2 450 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 SYVN1Q86TM6 617 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 AKAP14Q86UN6 197 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ADHFE1Q8IWW8 467 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 EID3Q8N140 333 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 POP5Q969H6 163 aaKnown RBP17.38■□□□□ 0.37
RAB40C-205ENST00000539661 AARSD1Q9BTE6 412 aaKnown RBP17.38■□□□□ 0.37
RAB40C-205ENST00000539661 BTBD2Q9BX70 525 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF229Q9UJW7 825 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 POU2F3Q9UKI9 436 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 UGT2A1Q9Y4X1 527 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 GNGT2O14610 69 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 AREL1O15033 823 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 MRPS14O60783 128 aaKnown RBP17.38■□□□□ 0.37
RAB40C-205ENST00000539661 SEC24AO95486 1093 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 GSNP06396 782 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 JUNDP17535 347 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 MTPNP58546 118 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 PHC1P78364 1004 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 YWHAHQ04917 246 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-205ENST00000539661 SELPLGQ14242 412 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ATP6AP1LQ52LC2 224 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 TAPT1Q6NXT6 567 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 RTL3Q8N8U3 475 aaKnown RBP17.38■□□□□ 0.37
RAB40C-205ENST00000539661 SETD9Q8NE22 299 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ERLEC1Q96DZ1 483 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 SLC47A1Q96FL8 570 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 PPM1MQ96MI6 270 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF583Q96ND8 569 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF408Q9H9D4 720 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 CSNK1G1Q9HCP0 422 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 TPRKBQ9Y3C4 175 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 ORC6Q9Y5N6 252 aa17.38■□□□□ 0.37
RAB40C-205ENST00000539661 MYBPHLA2RUH7 354 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 OR51F1A6NGY5 319 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 SAGE2PA6NJ88 616 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 CD3EAPO15446 510 aaKnown RBP17.37■□□□□ 0.37
RAB40C-205ENST00000539661 IRAK2O43187 625 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 LDB2O43679 373 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 PAGE1O75459 146 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 OGNP20774 298 aaKnown RBP17.37■□□□□ 0.37
RAB40C-205ENST00000539661 CXCR4P61073 352 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 FNDC5Q8NAU1 212 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 OR2T11Q8NH01 316 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 MCOLN3Q8TDD5 553 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms