RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 Q8NFD4 153 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 MRPS27Q92552 414 aaKnown RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 ABTB1Q969K4 478 aaPredicted RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 CDCA5Q96FF9 252 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 SIPA1Q96FS4 1042 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 FAM81BQ96LP2 452 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 ZNF48Q96MX3 618 aaPredicted RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 MS4A10Q96PG2 267 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 OR6C1Q96RD1 312 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 ADPGKQ9BRR6 497 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 SLC25A23Q9BV35 468 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 ANKRD2Q9GZV1 360 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 LRMDAQ9H2I8 198 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 ANKZF1Q9H8Y5 726 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 ZWILCHQ9H900 591 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 TCP11L1Q9NUJ3 509 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 TMEM30AQ9NV96 361 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 SIX4Q9UIU6 781 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 YIPF1Q9Y548 306 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 TTC3P53804 2025 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 A0A0B4J293 547 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 A0A1W2PP11 408 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 FAM90A10PA6NDY2 464 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 PLK4O00444 970 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 MID1O15344 667 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 BUD23O43709 281 aaKnown RBP5.29□□□□□ -1.56
SSR3-208ENST00000496050 CAMTA2O94983 1202 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 SP100P23497 879 aaPredicted RBP5.29□□□□□ -1.56
SSR3-208ENST00000496050 GABRA5P31644 462 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 PCGF2P35227 344 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 GNL1P36915 607 aaPredicted RBP5.29□□□□□ -1.56
SSR3-208ENST00000496050 COG7P83436 770 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 EGR4Q05215 589 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 HSPB3Q12988 150 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 PTPRCAPQ14761 206 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 ZNF260Q3ZCT1 412 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 KRBOX4Q5JUW0 171 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 FIGLAQ6QHK4 219 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 ZNF704Q6ZNC4 412 aaPredicted RBP5.29□□□□□ -1.56
SSR3-208ENST00000496050 ERN2Q76MJ5 926 aaKnown RBP5.29□□□□□ -1.56
SSR3-208ENST00000496050 ATG9AQ7Z3C6 839 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 PELI3Q8N2H9 469 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 C1orf52Q8N6N3 182 aaKnown RBP5.29□□□□□ -1.56
SSR3-208ENST00000496050 PI4KAP1Q8N8J0 262 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 ZNF114Q8NC26 417 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 KIF18AQ8NI77 898 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 TMED6Q8WW62 240 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 SLC44A1Q8WWI5 657 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 ATL1Q8WXF7 558 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 NXNL1Q96CM4 212 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 WNT5BQ9H1J7 359 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 UBTD1Q9HAC8 227 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 HHATLQ9HCP6 504 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 OCIAD1Q9NX40 245 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 ZNF224Q9NZL3 707 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 SLC24A2Q9UI40 661 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
SSR3-208ENST00000496050 OR2M5A3KFT3 312 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 ANKRD66B4E2M5 251 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 CCER2I3L3R5 266 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 TO15178 435 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 WDR46O15213 610 aaKnown RBP5.28□□□□□ -1.56
SSR3-208ENST00000496050 RECQL5O94762 991 aaPredicted RBP5.28□□□□□ -1.56
SSR3-208ENST00000496050 KDM4BO94953 1096 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 FDPSP14324 419 aaKnown RBP5.28□□□□□ -1.56
SSR3-208ENST00000496050 IFNAR1P17181 557 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 PTAFRP25105 342 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 ITGB8P26012 769 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 HOXA11P31270 313 aaPredicted RBP5.28□□□□□ -1.56
SSR3-208ENST00000496050 AMPHP49418 695 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 NFATC4Q14934 902 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 FAM198BQ6UWH4 519 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 FAM47EQ6ZV65 393 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 ADCK2Q7Z695 626 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 METTL23Q86XA0 190 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 THNSL1Q8IYQ7 743 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 RDM1Q8NG50 284 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 ELP5Q8TE02 316 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 ATP6V1E2Q96A05 226 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 SLAMF9Q96A28 289 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 PHF21BQ96EK2 531 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 TMEM19Q96HH6 336 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 FER1L6-AS2Q96M78 137 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 TTC14Q96N46 770 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 ZNF385AQ96PM9 386 aaKnown RBP5.28□□□□□ -1.56
SSR3-208ENST00000496050 SPAG5Q96R06 1193 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 PCYT2Q99447 389 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 EGFL8Q99944 293 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 SEMA6AQ9H2E6 1030 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 EQTNQ9NQ60 294 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 MRGBPQ9NV56 204 aa5.28□□□□□ -1.56
SSR3-208ENST00000496050 CLEC18AA5D8T8 446 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 HEPACAM2A8MVW5 462 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 SPRY1O43609 319 aaPredicted RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 MED24O75448 989 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 BMP10O95393 424 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 BMP15O95972 392 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 RPN1P04843 607 aaKnown RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 FCGR1AP12314 374 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms