RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 DOLKQ9UPQ8 538 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 CSNK1G3Q9Y6M4 447 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 IQCF5A8MTL0 148 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 TRIM38O00635 465 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 HAUS5O94927 633 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 FMO4P31512 558 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 LRP8Q14114 963 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 SUZ12Q15022 739 aaKnown RBP30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 GKN2Q86XP6 184 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 SFTPA2Q8IWL1 248 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 SETD7Q8WTS6 366 aaKnown RBP30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 CAMK1GQ96NX5 476 aa30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 SPATS2LQ9NUQ6 558 aaKnown RBP30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 INTS10Q9NVR2 710 aaKnown RBP30.09■■■□□ 2.41
CSNK1E-206ENST00000413574 NEMP2A6NFY4 417 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 SH3BP5O60239 455 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 AP2A2O94973 939 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 ANXA6P08133 673 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 ITGB6P18564 788 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 GABRB3P28472 473 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 ABCG1P45844 678 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 RNF187Q5TA31 235 aaPredicted RBP30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 CNSTQ6PJW8 725 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 AMZ2Q86W34 360 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 EIF1ADQ8N9N8 165 aaKnown RBP30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 LKAAEAR1Q8TD35 194 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 BIRC8Q96P09 236 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 TIMM29Q9BSF4 260 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 OSGEPL1Q9H4B0 414 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 TAAR2Q9P1P5 351 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 ZFATQ9P243 1243 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 PSAT1Q9Y617 370 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 SPEGQ15772 3267 aa30.08■■■□□ 2.41
CSNK1E-206ENST00000413574 CXorf49A8MYA2 514 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 PFDN6O15212 129 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 ACSL3O95573 720 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 C1QAP02745 245 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 GSTA2P09210 222 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 CTSL3PQ5NE16 218 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 FAM83HQ6ZRV2 1179 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 FAM46DQ8NEK8 389 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 FBF1Q8TES7 1133 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 EML2O95834 649 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 AHSGP02765 367 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 OR56A5P0C7T3 313 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 LIMK1P53667 647 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 NFE2L1Q14494 772 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 SLMAPQ14BN4 828 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 NAPRTQ6XQN6 538 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 KRT222Q8N1A0 295 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 LILRA3Q8N6C8 439 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 LINC00615Q96LM1 132 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 CCM2Q9BSQ5 444 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 TBC1D29Q9UFV1 150 aa30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 DNMT3AQ9Y6K1 912 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-206ENST00000413574 PIEZO1Q92508 2521 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 SNX2O60749 519 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 RPS3P23396 243 aaKnown RBP eCLIP30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 LEPRP48357 1165 aaKnown RBP30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 ARHGAP8P85298 464 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 PTRHD1Q6GMV3 140 aaKnown RBP30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 XKR5Q6UX68 686 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 NAXDQ8IW45 347 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 OR4C6Q8NH72 309 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 DPEP2Q9H4A9 486 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 NLGN3Q9NZ94 848 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 SIRPGQ9P1W8 387 aa30.06■■■□□ 2.4
CSNK1E-206ENST00000413574 MGAT4DA6NG13 374 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 FLRT2O43155 660 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 SIGLEC6O43699 453 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 MYF5P13349 255 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 ZNF549Q6P9A3 640 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 OR2L2Q8NH16 312 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 GABPB2Q8TAK5 448 aaPredicted RBP30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 NETO1Q8TDF5 533 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 RHBDD1Q8TEB9 315 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 PARD6BQ9BYG5 372 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 TXLNGYQ9BZA5 131 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 GNPTGQ9UJJ9 305 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 VPS9D1Q9Y2B5 631 aa30.05■■■□□ 2.4
CSNK1E-206ENST00000413574 PRR19A6NJB7 356 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 FAM159BA6NKW6 160 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 TRIM16O95361 564 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 RPL10P27635 214 aaKnown RBP30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 GRK6P43250 576 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 EFTUD2Q15029 972 aaKnown RBP eCLIP30.04■■■□□ 2.45e-18■■■□□ 18.3
CSNK1E-206ENST00000413574 SEPT7Q16181 437 aaKnown RBP30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 KBTBD12Q3ZCT8 623 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 WDR93Q6P2C0 686 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 CYS1Q717R9 158 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 CFAP206Q8IYR0 622 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 SDR16C5Q8N3Y7 309 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 SCG3Q8WXD2 468 aaKnown RBP30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 FAM136AQ96C01 138 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 PRDM8Q9NQV8 689 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 CEP250Q9BV73 2442 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 B4DGG1 531 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 NIPSNAP2O75323 286 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 SPAG6O75602 509 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 ADARP55265 1226 aaKnown RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms