RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 USP22Q9UPT9 525 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 IFT52Q9Y366 437 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 LOC100130705A0A1B0GUX0 176 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 RRN3P2A6NIE6 340 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 M0R3G1 203 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 GMNNO75496 209 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 USP2O75604 605 aaPredicted RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 INMTO95050 263 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 SLC2A3P11169 496 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 OGNP20774 298 aaKnown RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 PCYT1AP49585 367 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 SELENBP1Q13228 472 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 KCNAB2Q13303 367 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 IMPG1Q17R60 797 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 TIGD2Q4W5G0 525 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 TXNDC11Q6PKC3 985 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 NECAB2Q7Z6G3 386 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 RBM23Q86U06 439 aaKnown RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 SPNS2Q8IVW8 549 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 RTL3Q8N8U3 475 aaKnown RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 PROKR1Q8TCW9 393 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 RNF34Q969K3 372 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 TADA1Q96BN2 335 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 PCED1BQ96HM7 432 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 MOV10Q9HCE1 1003 aaKnown RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 VTA1Q9NP79 307 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 HEBP1Q9NRV9 189 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 RIMKLBQ9ULI2 386 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 HSPE1-MOB4S4R3N1 261 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 LRRC14BA6NHZ5 514 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 IRAK2O43187 625 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 XYLBO75191 536 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 MYO1DO94832 1006 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 PEX11BO96011 259 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 ITGAMP11215 1152 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 IL1RNP18510 177 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 IL12AP29459 219 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 PIGAP37287 484 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 ARSDP51689 593 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 PPP5CP53041 499 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 CXCR4P61073 352 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 VGLL4Q14135 290 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 NOMO2Q5JPE7 1267 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 SYT6Q5T7P8 510 aaPredicted RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 GALNT13Q8IUC8 556 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 SH3RF2Q8TEC5 729 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 CHAC2Q8WUX2 184 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 EXT2Q93063 718 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 REXO5Q96IC2 774 aaKnown RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 ZNF300Q96RE9 604 aaPredicted RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 HERC2P3Q9BVR0 1158 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 TMEM30AQ9NV96 361 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 PAK1IP1Q9NWT1 392 aaPredicted RBP17.57■□□□□ 0.4
NUP54-205ENST00000507257 TMEM98Q9Y2Y6 226 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 UGT2A1Q9Y4X1 527 aa17.57■□□□□ 0.4
NUP54-205ENST00000507257 GBF1Q92538 1859 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 SYCE1LA8MT33 242 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 BMP1P13497 986 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 JUNDP17535 347 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 RENBPP51606 427 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 EMX1Q04741 257 aaPredicted RBP17.56■□□□□ 0.4
NUP54-205ENST00000507257 PWP1Q13610 501 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 ADPRMQ3LIE5 342 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 MRNIPQ6NTE8 343 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 TUBA3EQ6PEY2 450 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 ARMC8Q8IUR7 673 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 RORBQ92753 470 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 PABPC5Q96DU9 382 aaKnown RBP17.56■□□□□ 0.4
NUP54-205ENST00000507257 AARSD1Q9BTE6 412 aaKnown RBP17.56■□□□□ 0.4
NUP54-205ENST00000507257 BTBD2Q9BX70 525 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 MAGIXQ9H6Y5 334 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 KLK14Q9P0G3 267 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 INTS6Q9UL03 887 aaKnown RBP17.56■□□□□ 0.4
NUP54-205ENST00000507257 CDH9Q9ULB4 789 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 AP3M1Q9Y2T2 418 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 V9GYQ6 96 aa17.56■□□□□ 0.4
NUP54-205ENST00000507257 LCHNA4D1U4 455 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 FAM47E-STBD1D6RA91 191 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 AREL1O15033 823 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 LDB2O43679 373 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 NADKO95544 446 aaPredicted RBP17.55■□□□□ 0.4
NUP54-205ENST00000507257 MVKQ03426 396 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 PCSK7Q16549 785 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 C6orf136Q5SQH8 315 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 THOC7Q6I9Y2 204 aaKnown RBP17.55■□□□□ 0.4
NUP54-205ENST00000507257 OR5K1Q8NHB7 308 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 RHOXF1Q8NHV9 184 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 GIPC2Q8TF65 315 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 DUSP21Q9H596 190 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 CRYL1Q9Y2S2 319 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 MAGED1Q9Y5V3 778 aaPredicted RBP17.55■□□□□ 0.4
NUP54-205ENST00000507257 PMF1-BGLAPU3KQ54 211 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 BRCA1P38398 1863 aaKnown RBP17.55■□□□□ 0.4
NUP54-205ENST00000507257 TTC34A8MYJ7 566 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 PAGE1O75459 146 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 CNTN5O94779 1100 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms