RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 TEX12Q9BXU0 123 aa16.94■□□□□ 0.3
TRPC1-201ENST00000273482 CDC14AQ9UNH5 594 aa16.94■□□□□ 0.3
TRPC1-201ENST00000273482 MBLAC1A4D2B0 266 aaPredicted RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 ARPC2O15144 300 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 PPP3CCP48454 512 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 ZNF284Q2VY69 593 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 INO80DQ53TQ3 878 aaPredicted RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 RPS27LQ71UM5 84 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 HBEGFQ99075 208 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 COQ7Q99807 217 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 C20orf27Q9GZN8 174 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 PCDH12Q9NPG4 1184 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 DPP7Q9UHL4 492 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 AGO1Q9UL18 857 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 RSL1D1O76021 490 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 SYN1P17600 705 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 SOAT1P35610 550 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 RPS24P62847 133 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 BOP1Q14137 746 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 ZNF423Q2M1K9 1284 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 ZNF549Q6P9A3 640 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 SPATA19Q7Z5L4 167 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 ZNF605Q86T29 641 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 ELMO1Q92556 727 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 SLC47A1Q96FL8 570 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 SLC9A7Q96T83 725 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 CCSER2Q9H7U1 834 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 TRIM39Q9HCM9 518 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 RASSF1Q9NS23 344 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 CENPXA8MT69 81 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 EIF2S1P05198 315 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 PWP1Q13610 501 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 PIGGQ5H8A4 983 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 P2RY8Q86VZ1 359 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 MLPHQ9BV36 600 aaPredicted RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 TMEM245Q9H330 911 aa16.93■□□□□ 0.3
TRPC1-201ENST00000273482 FBRSL1Q9HCM7 1045 aaKnown RBP16.93■□□□□ 0.3
TRPC1-201ENST00000273482 SYNDIG1LA6NDD5 238 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 A8MT66 165 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TSC22D2O75157 780 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 NDUFS2O75306 463 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 CCNKO75909 580 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 GNRH1P01148 92 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 GJA1P17302 382 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 PGGT1BP53609 377 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 NDUFA5Q16718 116 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 SLC44A2Q8IWA5 706 aaPredicted RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 BBS7Q8IWZ6 715 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.38e-9■■■■□ 22.9
TRPC1-201ENST00000273482 SLC39A8Q9C0K1 460 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 EBF1Q9UH73 591 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 SAMHD1Q9Y3Z3 626 aaKnown RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TNPO3Q9Y5L0 923 aaKnown RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 KRT20P35900 424 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 CHRNA4P43681 627 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 MYBPC1Q00872 1141 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 MTA1Q13330 715 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 UPP1Q16831 310 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TJAP1Q5JTD0 557 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 FBXL19Q6PCT2 694 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 SCAIQ8N9R8 606 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 PTCD2Q8WV60 388 aaKnown RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 HMCESQ96FZ2 354 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TBATAQ96M53 351 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 RBM4BQ9BQ04 359 aaKnown RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 RBM4Q9BWF3 364 aaKnown RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 OPTCQ9UBM4 332 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 BRWD3Q6RI45 1802 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 IL12RB1P42701 662 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 BCAP31P51572 246 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 ATP6V0D1P61421 351 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 CYP4F2P78329 520 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 CYP4F3Q08477 520 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TRIP4Q15650 581 aaPredicted RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 PDZK1Q5T2W1 519 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 LRRC49Q8IUZ0 686 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 PPP3R2Q96LZ3 170 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 AKTIPQ9H8T0 292 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 CCNB1IP1Q9NPC3 277 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 AP3M1Q9Y2T2 418 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 KIAA1551Q9HCM1 1747 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TBC1D3BA6NDS4 549 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 UBXN8O00124 270 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 BCKDKO14874 412 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 RHOQP17081 205 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 HALP42357 657 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 CLCQ05315 142 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 TIMM50Q3ZCQ8 353 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 C7orf61Q8IZ16 206 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 KBTBD8Q8NFY9 601 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 STYXQ8WUJ0 223 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 LRRC58Q96CX6 371 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 MTFMTQ96DP5 389 aaKnown RBP16.92■□□□□ 0.3
TRPC1-201ENST00000273482 PCDHGC4Q9Y5F7 938 aa16.92■□□□□ 0.3
TRPC1-201ENST00000273482 LAMB1P07942 1786 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms