RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Mrps33Q9D2R8 106 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 Chrnb2Q9ERK7 501 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 Epb41l4bQ9JMC8 527 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ppm1dQ9QZ67 598 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 CdylQ9WTK2 593 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 Krt6bQ9Z331 562 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 Alms1Q8K4E0 3251 aa14.65□□□□□ -0.06
Nup88-202ENSMUST00000108530 Gm6509A0A0J9YUV1 481 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Phf11bB4XVQ1 276 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 GmlE9PX31 176 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Gm10250G3X9L6 160 aaKnown RBP14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Gm6351K9J7D1 481 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ccdc138Q0VF22 680 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Zmym5Q3U2E2 627 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 CilpQ66K08 1184 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 PolnQ7TQ07 864 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Olfr765Q7TRI6 309 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Tmem184bQ8BG09 407 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Rcn2Q8BP92 320 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Crlf2Q8CII9 359 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Irak3Q8K4B2 609 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cd207Q8VBX4 331 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Olfr767Q8VG33 309 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Wdr6Q99ME2 1125 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 CatsperzQ9CQP8 194 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Rex1bdQ9CYZ6 169 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Atp5hQ9DCX2 161 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Trpc4apQ9JLV2 797 aa14.65□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ttc30a2A2AKQ8 664 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Vmn1r2A2AMT6 306 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Maml3D4QGC2 1135 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Gm3526E9PZM0 191 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Nlrp12E9Q5R7 1054 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Zfp788E9Q980 884 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Pou2f3P31362 431 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Kif5aP33175 1027 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Kcnj9P48543 393 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Pfdn6Q03958 127 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Fastkd1Q6DI86 829 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ppm1nQ8BGL1 404 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Tlk1Q8C0V0 766 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Sfrp1Q8C4U3 314 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Arhgap24Q8C4V1 747 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Q8CIL4 281 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 GcshQ91WK5 170 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ttc30a1Q99J38 664 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ttc30bQ9CY00 664 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Det1Q9D0A0 550 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 PdiltQ9DAN1 588 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Olfr706Q9EPF8 316 aa14.64□□□□□ -0.07
Nup88-202ENSMUST00000108530 Catsperg2C6KI89 1145 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Vmn2r112L7N221 857 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ebf3O08791 596 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Chil3O35744 398 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Pou4f1P17208 421 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ccr7P47774 378 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 MslnQ61468 625 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ddx51Q6P9R1 639 aaKnown RBP14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Sema3dQ8BH34 777 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Mill2Q8HWE5 355 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Klhl2Q8JZP3 593 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Vmn1r206Q8R277 312 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 DlstQ9D2G2 454 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Snrnp48Q9D361 337 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 IL36RNQ9QYY1 156 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Adam24Q9R160 761 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Bag6Q9Z1R2 1154 aaKnown RBP14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cldn7Q9Z261 211 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Slc25a14Q9Z2B2 325 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Smok3cA0A087WSF2 504 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 CatsperbA2RTF1 1109 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cldn34b1B1AZQ8 209 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Rundc3aO08576 446 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cyp2b19O55071 492 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 AlplP09242 524 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 MaxP28574 160 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Aup1P70295 410 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Kcnc2Q14B80 642 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Rnf38Q8BI21 518 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Slc6a17Q8BJI1 727 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 AgmoQ8BS35 447 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Abhd11Q8K4F5 307 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Olfr449Q8VGW8 311 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Olfr606Q8VGZ8 319 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Lgals12Q91VD1 314 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Mrgpra2Q91WW4 305 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Sult5a1Q91X36 291 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Krcc1Q99JT5 256 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 ClpsQ9CQC2 113 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 SarnpQ9D1J3 210 aaKnown RBP14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cldn34b2Q9D9N2 209 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ptk2bQ9QVP9 1009 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cyhr1Q9QXA1 311 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ptpn4Q9WU22 926 aa14.63□□□□□ -0.07
Nup88-202ENSMUST00000108530 Il17dA0A0B4J1G4 205 aa14.62□□□□□ -0.07
Nup88-202ENSMUST00000108530 Ssxb6A2BI74 170 aa14.62□□□□□ -0.07
Nup88-202ENSMUST00000108530 Cdr1E9Q0B4 517 aa14.62□□□□□ -0.07
Nup88-202ENSMUST00000108530 Zfp275G3X904 499 aa14.62□□□□□ -0.07
Nup88-202ENSMUST00000108530 Dnmt3aO88508 908 aaKnown RBP14.62□□□□□ -0.07
Nup88-202ENSMUST00000108530 Adh5P28474 374 aa14.62□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms