RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ARL14Q8N4G2 192 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 GRAMD1AQ96CP6 724 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 CAPZA3Q96KX2 299 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 COPS8Q99627 209 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 KIR2DS5A0A0G2JLQ3 304 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 A0A0G2JNG1 304 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 KIR2DS3K7RE56 304 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 SNX2O60749 519 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 IDSP22304 550 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 CASQ1P31415 396 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 MAGEA6P43360 314 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 TARDBPQ13148 414 aaKnown RBP eCLIP17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 SPIDRQ14159 915 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 KIR2DS5Q14953 304 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 CCDC38Q502W7 563 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 LYPLAL1Q5VWZ2 237 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 CDCP2Q5VXM1 449 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 RBM44Q6ZP01 1051 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 SLC9B2Q86UD5 537 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 AMZ2Q86W34 360 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 CREG2Q8IUH2 290 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 DCBLD1Q8N8Z6 715 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 RASGEF1AQ8N9B8 481 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 SH3KBP1Q96B97 665 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 OSGEPL1Q9H4B0 414 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 ZDHHC3Q9NYG2 299 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 TCAF1Q9Y4C2 921 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 PCYT1BQ9Y5K3 369 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 RNF215Q9Y6U7 377 aa17.03■□□□□ 0.32
SHKBP1-212ENST00000596163 LRP4O75096 1905 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 FAM149AA5PLN7 773 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 TMX2-CTNND1H3BSU7 103 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 CCDC188H7C350 402 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 GPR39O43194 453 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 POP7O75817 140 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 F3P13726 295 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 PPARGP37231 505 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 GPR3P46089 330 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 MAZP56270 477 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 ETF1P62495 437 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 PLA2G4EQ3MJ16 856 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 IYDQ6PHW0 289 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 AFTPHQ6ULP2 937 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 SERPINA9Q86WD7 417 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 CCNJLQ8IV13 435 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 ZNF547Q8IVP9 402 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 SFRP1Q8N474 314 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 Q8N9G6 341 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 GFM1Q96RP9 751 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 LRRN3Q9H3W5 708 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 FAM96AQ9H5X1 160 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 SYNDIG1Q9H7V2 258 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 TBC1D29Q9UFV1 150 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 PCYOX1Q9UHG3 505 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 DNAJC16Q9Y2G8 782 aa17.02■□□□□ 0.32
SHKBP1-212ENST00000596163 TRBV5-4A0A0C4DH59 114 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 CCDC78A2IDD5 438 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 OR2AG2A6NM03 316 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 PDZK1P1A8MUH7 402 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 F8W8V4 182 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 CCL22O00626 93 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 MLNP12872 115 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 ACRV1P26436 265 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 FASLGP48023 281 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 PRAMEP78395 509 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 KCNJ11Q14654 390 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 CLPPQ16740 277 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 BCL7AQ4VC05 210 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 FNBP1LQ5T0N5 605 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 UNQ6494/PRO21346Q6UXR6 183 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 WASH2PQ6VEQ5 465 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 SYDE1Q6ZW31 735 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 ZNF438Q7Z4V0 828 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 PCGF5Q86SE9 256 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 BEND7Q8N7W2 519 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 MCUQ8NE86 351 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 OR6P1Q8NGX9 317 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 SLCO2A1Q92959 643 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 HDAC10Q969S8 669 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 SGF29Q96ES7 293 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 DDX47Q9H0S4 455 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 VPS37BQ9H9H4 285 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 SARS2Q9NP81 518 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 WASH6PQ9NQA3 447 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 SLC23A2Q9UGH3 650 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 ANAPC5Q9UJX4 755 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 NEU2Q9Y3R4 380 aa17.01■□□□□ 0.31
SHKBP1-212ENST00000596163 TRBV23OR9-2A0A075B6M9 112 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 MAGEB16A2A368 324 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CCDC162PA2VCL2 907 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 TMEM8BA6NDV4 472 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 MGAT4DA6NG13 374 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 QSOX1O00391 747 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 NTN3O00634 580 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms