RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 USP53Q70EK8 1073 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GLT6D1Q7Z4J2 308 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LRRTM4Q86VH4 590 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PHYKPLQ8IUZ5 450 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FBXO39Q8N4B4 442 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FAM71DQ8N9W8 422 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SNIP1Q8TAD8 396 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC35B2Q8TB61 432 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF398Q8TD17 642 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LIN37Q96GY3 246 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PRR11Q96HE9 360 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FRMD8P1Q9BZ68 369 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 EPB41L5Q9HCM4 733 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TBC1D29Q9UFV1 150 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FEZ2Q9UHY8 353 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMPRSS11EQ9UL52 423 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PYCARDQ9ULZ3 195 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KCNK6Q9Y257 313 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 R3HDM2Q9Y2K5 976 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CELSR3Q9NYQ7 3312 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GLYATL1P3A0A0U1RQE8 302 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 A0A1W2PNU3 283 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BUD23O43709 281 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A9O60656 530 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SNX2O60749 519 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KCNJ13O60928 360 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TNFSF15O95150 251 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CRTAMO95727 393 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 EML2O95834 649 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CCDC175P0C221 793 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF7P17097 686 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A6P19224 532 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A1P22309 533 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A4P22310 534 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A3P35503 534 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A5P35504 534 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FASLGP48023 281 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PDX1P52945 283 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PDE1BQ01064 536 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ITGA9Q13797 1035 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GTF2H3Q13889 308 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LDLRAP1Q5SW96 308 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FAM151BQ6UXP7 276 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 RAB11FIP2Q7L804 512 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 B3GNT8Q7Z7M8 397 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC9B2Q86UD5 537 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC13A5Q86YT5 568 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KLHDC8BQ8IXV7 354 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SFRP1Q8N474 314 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 OR4K2Q8NGD2 314 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GDAP1Q8TB36 358 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC37A2Q8TED4 501 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TTC25Q96NG3 672 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC38A3Q99624 504 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DPYSL5Q9BPU6 564 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TBL1YQ9BQ87 522 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMEM121Q9BTD3 319 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FOXP3Q9BZS1 431 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A7Q9HAW7 530 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A10Q9HAW8 530 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 UGT1A8Q9HAW9 530 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ASCL3Q9NQ33 180 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LZTFL1Q9NQ48 299 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 THSD1Q9NS62 852 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KLC4Q9NSK0 619 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KCNK4Q9NYG8 393 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC23A2Q9UGH3 650 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ARL5AQ9Y689 179 aa9.6□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AHCTF1Q8WYP5 2266 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IGHV1OR21-1A0A087WYE8 117 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KIR2DS5A0A0G2JLQ3 304 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 A0A0G2JNG1 304 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KIR2DS3K7RE56 304 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PLD2O14939 933 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 MTX2O75431 263 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 METTL18O95568 372 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 F3P13726 295 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 XRCC1P18887 633 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PCBP4P57723 403 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GPLD1P80108 840 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 OLIG2Q13516 323 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PTPRCAPQ14761 206 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KIR2DS5Q14953 304 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 INSCQ1MX18 579 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 COL28A1Q2UY09 1125 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 P3H1Q32P28 736 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KHDC1Q4VXA5 237 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 NKAIN2Q5VXU1 208 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms