RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 FGBP02675 491 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 FASLGP48023 281 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 MXI1P50539 228 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 PPATQ06203 517 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 SRSF4Q08170 494 aaKnown RBP7.27□□□□□ -1.25
NUP54-215ENST00000514313 CTF1Q16619 201 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 SYT16Q17RD7 645 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 PRTGQ2VWP7 1150 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 MPP7Q5T2T1 576 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 OTUD1Q5VV17 481 aaPredicted RBP7.27□□□□□ -1.25
NUP54-215ENST00000514313 MORN5Q5VZ52 161 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 TYW3Q6IPR3 259 aaKnown RBP7.27□□□□□ -1.25
NUP54-215ENST00000514313 ATG9AQ7Z3C6 839 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 IRF2BP2Q7Z5L9 587 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 IQCA1Q86XH1 822 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 SETD6Q8TBK2 473 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 TBC1D16Q8TBP0 767 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 OIT3Q8WWZ8 545 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 FAM162AQ96A26 154 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 NXNL1Q96CM4 212 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 NLRP4Q96MN2 994 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 SPAG5Q96R06 1193 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 OLFM1Q99784 485 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 SEMA3CQ99985 751 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 NOL11Q9H8H0 719 aaKnown RBP7.27□□□□□ -1.25
NUP54-215ENST00000514313 IL36RNQ9UBH0 155 aa7.27□□□□□ -1.25
NUP54-215ENST00000514313 A0A1W2PPM1 405 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 TMEM189-UBE2V1I3L0A0 370 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 J3QR06 171 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 SOCS6O14544 535 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 HS3ST1O14792 307 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 RGS14O43566 566 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 SYF2O95926 243 aaKnown RBP7.26□□□□□ -1.25
NUP54-215ENST00000514313 PFKFB1P16118 471 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 UGT1A1P22309 533 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 HOXC8P31273 242 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 MMP13P45452 471 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 NUDT6P53370 316 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 UBE2V1Q13404 147 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 EZH2Q15910 746 aaKnown RBP7.26□□□□□ -1.25
NUP54-215ENST00000514313 FSCBQ5H9T9 825 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 MTX3Q5HYI7 312 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 PPP1R21Q6ZMI0 780 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 EMC1Q8N766 993 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 NANOGP1Q8N7R0 232 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 SLC38A9Q8NBW4 561 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 ACVR1CQ8NER5 493 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 NOX4Q9NPH5 578 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 EQTNQ9NQ60 294 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 PRMT7Q9NVM4 692 aaPredicted RBP7.26□□□□□ -1.25
NUP54-215ENST00000514313 DNAJB9Q9UBS3 223 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 IL17BQ9UHF5 180 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 ZNF541Q9H0D2 1346 aa7.26□□□□□ -1.25
NUP54-215ENST00000514313 ARHGEF37A1IGU5 675 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 ANKRD28O15084 1053 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 KCNN4O15554 427 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 CH25HO95992 272 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 LINGO3P0C6S8 592 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 ACHEP22303 614 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 CLDN20P56880 219 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 ZNF273Q14593 569 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
NUP54-215ENST00000514313 KCNT1Q5JUK3 1230 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 DNTTIP2Q5QJE6 756 aaKnown RBP7.25□□□□□ -1.25
NUP54-215ENST00000514313 FNBP1LQ5T0N5 605 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 KRT39Q6A163 491 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 TMEM173Q86WV6 379 aaPredicted RBP7.25□□□□□ -1.25
NUP54-215ENST00000514313 CCAR2Q8N163 923 aaKnown RBP7.25□□□□□ -1.25
NUP54-215ENST00000514313 ZNF713Q8N859 430 aaPredicted RBP7.25□□□□□ -1.25
NUP54-215ENST00000514313 IQUBQ8NA54 791 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 TXNDC15Q96J42 360 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 MS4A10Q96PG2 267 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 NEK1Q96PY6 1258 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 MMTAG2Q9BU76 263 aaKnown RBP7.25□□□□□ -1.25
NUP54-215ENST00000514313 C2orf40Q9H1Z8 148 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 PIH1D3Q9NQM4 214 aaKnown RBP7.25□□□□□ -1.25
NUP54-215ENST00000514313 FBXL2Q9UKC9 423 aa7.25□□□□□ -1.25
NUP54-215ENST00000514313 RPS10-NUDT3A0A1W2PQS6 291 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 ASAP2O43150 1006 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 SPRY3O43610 288 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 MOSPD3O75425 235 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 LMO1P25800 156 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 GABRA5P31644 462 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 HNRNPKP61978 463 aaKnown RBP eCLIP7.24□□□□□ -1.25
NUP54-215ENST00000514313 SNRPEP62304 92 aaKnown RBP7.24□□□□□ -1.25
NUP54-215ENST00000514313 GPS2Q13227 327 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 MELKQ14680 651 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 AMZ1Q400G9 498 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 KRTCAP3Q53RY4 240 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 SLC10A5Q5PT55 438 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 ZDHHC20Q5W0Z9 365 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 ALS2CLQ60I27 953 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 C18orf63Q68DL7 685 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 DBX2Q6ZNG2 339 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 ZNF534Q76KX8 674 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 PM20D2Q8IYS1 436 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 ZFAND2BQ8WV99 257 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 ZNF558Q96NG5 402 aa7.24□□□□□ -1.25
NUP54-215ENST00000514313 CMKLR1Q99788 373 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms