RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SOAT2O75908 522 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 NDST3O95803 873 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 CHRNA1P02708 482 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 UROSP10746 265 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 MTHFRP42898 656 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ISL1P61371 349 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ECT2LQ008S8 904 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 TIAL1Q01085 375 aaKnown RBP eCLIP17.6■□□□□ 0.41
NUP54-205ENST00000507257 CD47Q08722 323 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 OR4D1Q15615 310 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 PFKFB4Q16877 469 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 FUT11Q495W5 492 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 PERM1Q5SV97 790 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 LDLRAP1Q5SW96 308 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 PRAMEF18Q5VWM3 479 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 FAM219BQ5XKK7 198 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ANKS6Q68DC2 871 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 LAIR2Q6ISS4 152 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 SLC2A7Q6PXP3 512 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ZFP90Q8TF47 636 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 HPS1Q92902 700 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 POP5Q969H6 163 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 RPL10LQ96L21 214 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 PAPPA2Q9BXP8 1791 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 H3BRB1 525 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 SLC1A7O00341 560 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 STX16O14662 325 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 KPNA6O60684 536 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 GPR32O75388 356 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 CHEK2O96017 543 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 MT-ND1P03886 318 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 AKAP5P24588 427 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 UFM1P61960 85 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 PRKG2Q13237 762 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 HIST2H2ACQ16777 129 aaPredicted RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 CTU2Q2VPK5 515 aaKnown RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 RFX4Q33E94 735 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 ARTNQ5T4W7 220 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 WSCD1Q658N2 575 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 DLEU7Q6UYE1 221 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 PIWIL3Q7Z3Z3 882 aaKnown RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 PIM3Q86V86 326 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 ZCCHC7Q8N3Z6 543 aaKnown RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 ATP6V0D2Q8N8Y2 350 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 OR8J3Q8NGG0 315 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 OR52K2Q8NGK3 314 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 SGCDQ92629 289 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 KIAA1191Q96A73 305 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 NSUN5Q96P11 429 aaKnown RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 AMBRA1Q9C0C7 1298 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 RMI1Q9H9A7 625 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 C3orf18Q9UK00 162 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 BTRCQ9Y297 605 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 SNX2O60749 519 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 MRPS14O60783 128 aaKnown RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 CES1P23141 567 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 LHX1P48742 406 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 TPD52P55327 224 aaPredicted RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 NRG1Q02297 640 aaPredicted RBP17.59■□□□□ 0.41
NUP54-205ENST00000507257 INAQ16352 499 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 MEP1AQ16819 746 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 INAVAQ3KP66 663 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 ZNF691Q5VV52 312 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 LGI2Q8N0V4 545 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 TMEM86AQ8N2M4 240 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 STAG3L4Q8TBR4 150 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 FAR1Q8WVX9 515 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 C17orf50Q8WW18 174 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 DGCR6LQ9BY27 220 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 DERL2Q9GZP9 239 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 ATXN3LQ9H3M9 355 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 SCUBE2Q9NQ36 999 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 SLAMF8Q9P0V8 285 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 KLHL3Q9UH77 587 aa17.59■□□□□ 0.41
NUP54-205ENST00000507257 WASH4PA8MWX3 477 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 KLK8O60259 260 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 CRCPO75575 148 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 MLYCDO95822 493 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 BMP4P12644 408 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 HOXD8P13378 290 aaPredicted RBP17.58■□□□□ 0.4
NUP54-205ENST00000507257 DARSP14868 501 aaKnown RBP17.58■□□□□ 0.4
NUP54-205ENST00000507257 CD40LGP29965 261 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 KPNA1P52294 538 aaPredicted RBP17.58■□□□□ 0.4
NUP54-205ENST00000507257 TAPT1Q6NXT6 567 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 ZNF549Q6P9A3 640 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 FBXO39Q8N4B4 442 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 OR6P1Q8NGX9 317 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 DYNC2LI1Q8TCX1 351 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 EDEM1Q92611 657 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 YIPF6Q96EC8 236 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 SMARCD1Q96GM5 515 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 TXNDC15Q96J42 360 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 KLHL25Q9H0H3 589 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 TRIT1Q9H3H1 467 aaKnown RBP17.58■□□□□ 0.4
NUP54-205ENST00000507257 MROH8Q9H579 483 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 SYTL2Q9HCH5 934 aa17.58■□□□□ 0.4
NUP54-205ENST00000507257 MARCH4Q9P2E8 410 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms