RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HJURPQ8NCD3 748 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 OR8K5Q8NH50 307 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 DNAAF4Q8WXU2 420 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 LGALS12Q96DT0 336 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLX1AQ9BQ83 275 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 PSD2Q9BQI7 771 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 RAB6CQ9H0N0 254 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 FBXW11Q9UKB1 542 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 KCNK7Q9Y2U2 307 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 JRKLQ9Y4A0 524 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 PRAG1Q86YV5 1406 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 SNED1Q8TER0 1413 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 KIAA1210Q9ULL0 1709 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 ARHGEF40Q8TER5 1519 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 A0A0G2JNG1 304 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 KANSL1LA0AUZ9 987 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 NPHP1O15259 732 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 HCRTR2O43614 444 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 PDE9AO76083 593 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 TBX6O95947 436 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 TSHBP01222 138 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 NR3C1P04150 777 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 LIPFP07098 398 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 ERVK-10P10266 1014 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 HRH2P25021 359 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 GALCP54803 685 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 ERVK11-1P61568 191 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 GNB1P62873 340 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 SPOCK1Q08629 439 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 KIR2DS5Q14953 304 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZC2HC1CQ53FD0 456 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 INTS11Q5TA45 600 aaKnown RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 FAM53AQ6NSI3 398 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 NOTCH2NLQ7Z3S9 236 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 LONP2Q86WA8 852 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 APLFQ8IW19 511 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 ARHGAP12Q8IWW6 846 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC5A8Q8N695 610 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 EMC1Q8N766 993 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC38A9Q8NBW4 561 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 RFFLQ8WZ73 363 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 TAF15Q92804 592 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 ELMOD3Q96FG2 381 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 WBP1Q96G27 269 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 C1orf74Q96LT6 269 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 GFI1Q99684 422 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC26A6Q9BXS9 759 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 SIL1Q9H173 461 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 PDCL3Q9H2J4 239 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 BICC1Q9H694 974 aaKnown RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 MAGIXQ9H6Y5 334 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 EPB41L5Q9HCM4 733 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 MBNL1Q9NR56 388 aaKnown RBP3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 RRP7BPQ9NSQ0 103 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 SETD4Q9NVD3 440 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 DNAJB4Q9UDY4 337 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 PGAP2Q9UHJ9 254 aa3.16□□□□□ -1.9
HMGB1P29-201ENST00000505659 A0A1W2PPI3 338 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 DUXAA6NLW8 204 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 MAP2K7O14733 419 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF217O75362 1048 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 NDUFS3O75489 264 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 TFAP2AP05549 437 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF23P17027 643 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ANXA7P20073 488 aaKnown RBP3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ACADLP28330 430 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ELF1P32519 619 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 PIK3CAP42336 1068 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZBED6P86452 979 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 GOLGA8DPQ0D2H9 430 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 PPIGQ13427 754 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 KIR2DS3Q14952 304 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 NAB2Q15742 525 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ADIPOQQ15848 244 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 SOWAHCQ53LP3 525 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 MMS22LQ6ZRQ5 1243 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 C1orf52Q8N6N3 182 aaKnown RBP3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 TRIM58Q8NG06 486 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF473Q8WTR7 871 aaKnown RBP3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ABHD8Q96I13 439 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 GAD1Q99259 594 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 SEPT5Q99719 369 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 BARHL1Q9BZE3 327 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 SEMA6AQ9H2E6 1030 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 ACAD8Q9UKU7 415 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM98Q9Y2Y6 226 aa3.15□□□□□ -1.91
HMGB1P29-201ENST00000505659 A0A1B0GU03 582 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 ANKRD66B4E2M5 251 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM189-UBE2V1I3L0A0 370 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PLK4O00444 970 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PCDH7O60245 1069 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 BMP10O95393 424 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 GCNT3O95395 438 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 EIF2S1P05198 315 aaKnown RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PRSS56P0CW18 603 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 SELLP14151 372 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 CHRNB4P30926 498 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 MAP2K2P36507 400 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 MMP15P51511 669 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 MLLT10P55197 1068 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms