RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 FBXO5Q9UKT4 447 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CCNKO75909 580 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 PRKCAP17252 672 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 ATN1P54259 1190 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 PCSK7Q16549 785 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 SYT16Q17RD7 645 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 NXNL2Q5VZ03 156 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 GLYATQ6IB77 296 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 NAPEPLDQ6IQ20 393 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 NEK10Q6ZWH5 1172 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 PHYKPLQ8IUZ5 450 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 SLC38A6Q8IZM9 456 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 DYNC2LI1Q8TCX1 351 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 KIF12Q96FN5 646 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 HOPXQ9BPY8 73 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 FICDQ9BVA6 458 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 DDX28Q9NUL7 540 aaKnown RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 GMIPQ9P107 970 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 ZNF639Q9UID6 485 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 AGO1Q9UL18 857 aaKnown RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 CRYL1Q9Y2S2 319 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 SNX5Q9Y5X3 404 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 COMMD10Q9Y6G5 202 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 SYCE1LA8MT33 242 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 ZNF99A8MXY4 864 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 RAD51BO15315 384 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 IDH3BO43837 385 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 HS6ST1O60243 411 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 DEAF1O75398 565 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 SOAT2O75908 522 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 GABARAPO95166 117 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 FTH1P02794 183 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 IL12AP29459 219 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CDKN2DP55273 166 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 MBTD1Q05BQ5 628 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 ILF2Q12905 390 aaKnown RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 TAF2Q6P1X5 1199 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 USP50Q70EL3 339 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 MCOLN3Q8TDD5 553 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 BPIFB1Q8TDL5 484 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 VMP1Q96GC9 406 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 TXNDC15Q96J42 360 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 HSFY1Q96LI6 401 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 ACOX2Q99424 681 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 BARD1Q99728 777 aaKnown RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 BDH2Q9BUT1 245 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 PARVBQ9HBI1 364 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 H0YAE9 185 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 UBXN8O00124 270 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CHRNA1P02708 482 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 LCKP06239 509 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CCDC159P0C7I6 412 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 IGFBP6P24592 240 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 CLCNKBP51801 687 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CDH17Q12864 832 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 RAPSNQ13702 412 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 SIM2Q14190 667 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 COL19A1Q14993 1142 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 ZNF678Q5SXM1 525 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CCSAPQ6IQ19 270 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 DCP1BQ8IZD4 617 aaKnown RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 TP53I13Q8NBR0 393 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 OR7G1Q8NGA0 311 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 KLRG1Q96E93 195 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 BTN2A3PQ96KV6 586 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 FDXACB1Q9BRP7 624 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 KIFC1Q9BW19 673 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 CYP3A43Q9HB55 503 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 SEMA4BQ9NPR2 832 aaPredicted RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 NRBP2Q9NSY0 501 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
TPM3-215ENST00000469717 PRRC2BQ5JSZ5 2229 aaKnown RBP7.88□□□□□ -1.15
TPM3-215ENST00000469717 LINC00854A0A1B0GVQ3 168 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 ARIH2O95376 493 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 VTNP04004 478 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 EPHA2P29317 976 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 GGT5P36269 586 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 ZFP36L2P47974 494 aaKnown RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 DNAJB13P59910 316 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 IL5RAQ01344 420 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 TRIP4Q15650 581 aaPredicted RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 PSMD5Q16401 504 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 PFKFB4Q16877 469 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 GNASQ5JWF2 1037 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 PKN3Q6P5Z2 889 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 BLOC1S3Q6QNY0 202 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 CCBE1Q6UXH8 406 aaPredicted RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 RIMKLAQ8IXN7 391 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 PTGR2Q8N8N7 351 aaPredicted RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 RHOXF1Q8NHV9 184 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 HDAC2Q92769 488 aaKnown RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 COPS5Q92905 334 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 PABPC5Q96DU9 382 aaKnown RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 C12orf42Q96LP6 360 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 PARK7Q99497 189 aaKnown RBP7.87□□□□□ -1.15
TPM3-215ENST00000469717 TTYH2Q9BSA4 534 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 ZBED2Q9BTP6 218 aa7.87□□□□□ -1.15
TPM3-215ENST00000469717 FZD8Q9H461 694 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms