RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 UGT1A8Q9HAW9 530 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 RDH14Q9HBH5 336 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 DNAJC16Q9Y2G8 782 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 PCYT1BQ9Y5K3 369 aaPredicted RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 A0A087WV48 116 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 PDZK1P1A8MUH7 402 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 E7EVH7 732 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 PLD2O14939 933 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 PRAMEF1O95521 474 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 METTL18O95568 372 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 GAS8O95995 478 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 IFNB1P01574 187 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 MSH3P20585 1137 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 IDSP22304 550 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 CD1CP29017 333 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 HADHAP40939 763 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
RFFL-204ENST00000414419 PDX1P52945 283 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 GDF10P55107 478 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 GPLD1P80108 840 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 CCZ1BP86790 482 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 CCZ1P86791 482 aaPredicted RBP11.05□□□□□ -0.64
RFFL-204ENST00000414419 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 PTPRCAPQ14761 206 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 NR1D2Q14995 579 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 IGF2-ASQ6U949 168 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 LINC00523Q86TU6 105 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 TRIM48Q8IWZ4 208 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 TAB3Q8N5C8 712 aaPredicted RBP11.05□□□□□ -0.64
RFFL-204ENST00000414419 MAIP1Q8WWC4 291 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 C1orf54Q8WWF1 131 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 CCDC97Q96F63 343 aaPredicted RBP11.05□□□□□ -0.64
RFFL-204ENST00000414419 NAF1Q96HR8 494 aaKnown RBP11.05□□□□□ -0.64
RFFL-204ENST00000414419 DPYSL5Q9BPU6 564 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 ASB8Q9H765 288 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 ARNT2Q9HBZ2 717 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 SARS2Q9NP81 518 aaKnown RBP11.05□□□□□ -0.64
RFFL-204ENST00000414419 PRDM8Q9NQV8 689 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 PPP2R2CQ9Y2T4 447 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 PIKFYVEQ9Y2I7 2098 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 FAM208BQ5VWN6 2430 aa11.05□□□□□ -0.64
RFFL-204ENST00000414419 IGHV1OR21-1A0A087WYE8 117 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ERI2A8K979 691 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 AGRPO00253 132 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 LIASO43766 372 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 DUX1O43812 170 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 KCNJ13O60928 360 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 SRP72O76094 671 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 EML2O95834 649 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 VIPP01282 170 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 RALBP11234 206 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 FDFT1P37268 417 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ZFP36L1Q07352 338 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 NFATC2Q13469 925 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 SNX1Q13596 522 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 SEPT7Q16181 437 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 LONRF2Q1L5Z9 754 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 COL28A1Q2UY09 1125 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 KHDC1Q4VXA5 237 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 GPRC6AQ5T6X5 926 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 NKAIN2Q5VXU1 208 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 TMEM220Q6QAJ8 160 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 AMZ2Q86W34 360 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ZNF761Q86XN6 746 aaPredicted RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 JAMLQ86YT9 394 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 CCDC89Q8N998 374 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 DDHD1Q8NEL9 900 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 OR13C4Q8NGS5 318 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 KCNE4Q8WWG9 221 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 ULK4Q96C45 1275 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 DCUN1D1Q96GG9 259 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ZNF514Q96K75 400 aaPredicted RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 SEMA6CQ9H3T2 930 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 ASCL3Q9NQ33 180 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 SMOXQ9NWM0 555 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
RFFL-204ENST00000414419 CPNE7Q9UBL6 633 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 SLC23A2Q9UGH3 650 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 FKBPLQ9UIM3 349 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 CRLS1Q9UJA2 301 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 TMPRSS11EQ9UL52 423 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 LOXL2Q9Y4K0 774 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 SLC30A1Q9Y6M5 507 aa11.04□□□□□ -0.64
RFFL-204ENST00000414419 A0A1W2PNU3 283 aaPredicted RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 OR2AG2A6NM03 316 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 GPR39O43194 453 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 POP7O75817 140 aaKnown RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 AP2A1O95782 977 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 TPH1P17752 444 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 ITGALP20701 1170 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 RPL10P27635 214 aaKnown RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 ITPKBP27987 946 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 HALP42357 657 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 MAPK9P45984 424 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 LIMK2P53671 638 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 SQSTM1Q13501 440 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms