RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TVP23AA6NH52 213 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 UROSP10746 265 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CD83Q01151 205 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 GRB10Q13322 594 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 IKBKEQ14164 716 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 FSCN1Q16658 493 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 PABPC1LQ4VXU2 614 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 XRRA1Q6P2D8 792 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 KLHL35Q6PF15 583 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 USP30Q70CQ3 517 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 NXNL1Q96CM4 212 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 WRAP53Q9BUR4 548 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 GDAP2Q9NXN4 497 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 PRELID1Q9Y255 219 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 METP08581 1390 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 LRRC72A6NJI9 287 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 E7EQ34 232 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 M0R129 80 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 MEN1O00255 615 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 RARAP10276 462 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 GPD2P43304 727 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 LACTB2Q53H82 288 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF709Q8N972 641 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 OR8D1Q8WZ84 308 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 TUBGCP5Q96RT8 1024 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 SEMA3CQ99985 751 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CCNB1IP1Q9NPC3 277 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 VIPP01282 170 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 GNB3P16520 340 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 GRK6P43250 576 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 PEX6Q13608 980 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 VTCN1Q7Z7D3 282 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CENPSQ8N2Z9 138 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF398Q8TD17 642 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TSSK3Q96PN8 268 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 FXYD6-FXYD2A0A087WZ82 144 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 KAT7O95251 611 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CCNE2O96020 404 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 GZMAP12544 262 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF101Q8IZC7 436 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 FAM151AQ8WW52 585 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CNDP2Q96KP4 475 aaKnown RBP16.28■□□□□ 0.2
PTCH1-201ENST00000331920 KLHL15Q96M94 604 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TSPAN18Q96SJ8 248 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 PHB2Q99623 299 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 FXYD6Q9H0Q3 95 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 PNO1Q9NRX1 252 aaKnown RBP16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CD84Q9UIB8 345 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 A0A0J9YYE9 177 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ITGA5P08648 1049 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 RPL22P35268 128 aaKnown RBP16.28■□□□□ 0.2
PTCH1-201ENST00000331920 DLG2Q15700 870 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ODF4Q2M2E3 257 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ANKS1BQ7Z6G8 1248 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 UBE2Q1Q7Z7E8 422 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 C16orf58Q96GQ5 468 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 VAT1Q99536 393 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ADAM2Q99965 735 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 SLC5A7Q9GZV3 580 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 FABP12A6NFH5 140 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 PEX14O75381 377 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 RAB27AP51159 221 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CCR3P51677 355 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ALG10BQ5I7T1 473 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 BSNDQ8WZ55 320 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ATP7AQ04656 1500 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 HSPA12AO43301 675 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 SHBGP04278 402 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 PVALBP20472 110 aaPredicted RBP16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TLE2Q04725 743 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 KCTD19Q17RG1 926 aaPredicted RBP16.28■□□□□ 0.2
PTCH1-201ENST00000331920 SV2AQ7L0J3 742 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 MAB21L3Q8N8X9 362 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 OR7D4Q8NG98 312 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 OR5M3Q8NGP4 307 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TTYH2Q9BSA4 534 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TOR1BO14657 336 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ORC5O43913 435 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 FABP3P05413 133 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF12P17014 697 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 STOMP27105 288 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 GCNT6Q5T4J0 391 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 TMED4Q7Z7H5 227 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CAVIN3Q969G5 261 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 RFKQ969G6 155 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 MTRRQ9UBK8 725 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
PTCH1-201ENST00000331920 B8ZZF3 427 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 WASH3PC4AMC7 463 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 CRTC2Q53ET0 693 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 CFAP206Q8IYR0 622 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms