RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KCNK4Q9NYG8 393 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 PKD1L2Q7Z442 2459 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 ZFC3H1O60293 1989 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 PLD2O14939 933 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 PRAMEF1O95521 474 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 CD1CP29017 333 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 PCBP4P57723 403 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 HHEXQ03014 270 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 OASLQ15646 514 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 PLA2G4EQ3MJ16 856 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 CHCHD2P9Q5T1J5 151 aaPredicted RBP27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 USP53Q70EK8 1073 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 RAB11FIP2Q7L804 512 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 TRAPPC5Q8IUR0 188 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 ZNF547Q8IVP9 402 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 FBXO39Q8N4B4 442 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 HNRNPLLQ8WVV9 542 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 TMEM159Q96B96 161 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 SH3KBP1Q96B97 665 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 PRR11Q96HE9 360 aaPredicted RBP27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 RDH14Q9HBH5 336 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 PRDM8Q9NQV8 689 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 SLC23A2Q9UGH3 650 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 ZNF148Q9UQR1 794 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 KCTD3Q9Y597 815 aa27.23■■□□□ 1.95
ATPAF1-201ENST00000329231 IGHV1OR21-1A0A087WYE8 117 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 VCLP18206 1134 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 GPLD1P80108 840 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 GPRC6AQ5T6X5 926 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 C19orf48Q6RUI8 117 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 SLITRK4Q8IW52 837 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 C1orf54Q8WWF1 131 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 DPYSL5Q9BPU6 564 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 KCNF1Q9H3M0 494 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 FKBPLQ9UIM3 349 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 DNAJC16Q9Y2G8 782 aa27.22■■□□□ 1.95
ATPAF1-201ENST00000329231 GPR39O43194 453 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 SRP72O76094 671 aaKnown RBP27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 TNFSF15O95150 251 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 AP2A1O95782 977 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 HADHAP40939 763 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 SQSTM1Q13501 440 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 PHF19Q5T6S3 580 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 TMPRSS9Q7Z410 1059 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 ZNF248Q8NDW4 579 aa27.21■■□□□ 1.95
ATPAF1-201ENST00000329231 PMS2P1A4D2B8 440 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 KCNJ13O60928 360 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 IFNB1P01574 187 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 ITGA2BP08514 1039 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 ABCG1P45844 678 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 ZNF140P52738 457 aaPredicted RBP27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 SNX1Q13596 522 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 NKAIN2Q5VXU1 208 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 LINC00523Q86TU6 105 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 RASGEF1AQ8N9B8 481 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 OR13C4Q8NGS5 318 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 OR10G6Q8NH81 332 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 MAIP1Q8WWC4 291 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 AHCYL2Q96HN2 611 aaKnown RBP27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 CMKLR1Q99788 373 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 NUDT22Q9BRQ3 303 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 TLR10Q9BXR5 811 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 SEMA6CQ9H3T2 930 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 ASB8Q9H765 288 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 AKAP7Q9P0M2 348 aaPredicted RBP27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 CPNE7Q9UBL6 633 aa27.2■■□□□ 1.94
ATPAF1-201ENST00000329231 ERI2A8K979 691 aaKnown RBP27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 PDZK1P1A8MUH7 402 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 CDRT15L2A8MXV6 281 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 JMJD7P0C870 316 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 MSH3P20585 1137 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 IDSP22304 550 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 AKT1P31749 480 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 FDFT1P37268 417 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 NFATC2Q13469 925 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 COL28A1Q2UY09 1125 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 C11orf96Q7Z7L8 435 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 ZNF761Q86XN6 746 aaPredicted RBP27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 TAB3Q8N5C8 712 aaPredicted RBP27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 ZNF514Q96K75 400 aaPredicted RBP27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 LHX6Q9UPM6 363 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 LOXL2Q9Y4K0 774 aa27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 DNMT3AQ9Y6K1 912 aaPredicted RBP27.19■■□□□ 1.94
ATPAF1-201ENST00000329231 PRR19A6NJB7 356 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 LDB2O43679 373 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 XRCC1P18887 633 aaPredicted RBP27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 CA5AP35218 305 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 PPM1FP49593 454 aaPredicted RBP27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 TMPRSS15P98073 1019 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 XIAPP98170 497 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 CCDC173Q0VFZ6 552 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 CCNG2Q16589 344 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 LONRF2Q1L5Z9 754 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 KIF26BQ2KJY2 2108 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 TMEM220Q6QAJ8 160 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 WASH2PQ6VEQ5 465 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 AMZ2Q86W34 360 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 CCDC89Q8N998 374 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 OR4D9Q8NGE8 314 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms