RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 HMGCLL1Q8TB92 370 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 IRF7Q92985 503 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ISG20Q96AZ6 181 aaKnown RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 TNKS2Q9H2K2 1166 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 SPAG4Q9NPE6 437 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 TBC1D14Q9P2M4 693 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 TRAF6Q9Y4K3 522 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 TRIM24O15164 1050 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 TNFAIP8O95379 198 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 PRAMEF12O95522 483 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ALPIP09923 528 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 SMIM18P0DKX4 95 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 MYOGP15173 224 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ZNF37AP17032 561 aaPredicted RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 GRIA2P42262 883 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 SNRPD1P62314 119 aaKnown RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 NTHL1P78549 312 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ZNF77Q15935 545 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 FUT11Q495W5 492 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 AGKQ53H12 422 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 AARS2Q5JTZ9 985 aaKnown RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ZNF678Q5SXM1 525 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 PIANPQ8IYJ0 282 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ZNF557Q8N988 423 aaPredicted RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 RPL10LQ96L21 214 aaKnown RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 C19orf43Q9BQ61 176 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ALG9Q9H6U8 611 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ZNF696Q9H7X3 374 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 SYTL2Q9HCH5 934 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 TAS2R13Q9NYV9 303 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 ZMYM5Q9UJ78 669 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 HS3ST2Q9Y278 367 aa18.1■□□□□ 0.49
SHISA3-201ENST00000319234 MTF2Q9Y483 593 aaPredicted RBP18.1■□□□□ 0.49
SHISA3-201ENST00000319234 A0A0J9YYE9 177 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 NEDD8-MDP1E9PL57 170 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 TRBC1P01850 177 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 MSX2P35548 267 aaPredicted RBP18.09■□□□□ 0.49
SHISA3-201ENST00000319234 RPL5P46777 297 aaKnown RBP18.09■□□□□ 0.49
SHISA3-201ENST00000319234 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
SHISA3-201ENST00000319234 RYBPQ8N488 228 aaPredicted RBP18.09■□□□□ 0.49
SHISA3-201ENST00000319234 RNF148Q8N7C7 305 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 NAT14Q8WUY8 206 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 EID2BQ96D98 161 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 FIS1Q9Y3D6 152 aa18.09■□□□□ 0.49
SHISA3-201ENST00000319234 MKI67P46013 3256 aaKnown RBP18.09■□□□□ 0.49
SHISA3-201ENST00000319234 A0A0U1RQS6 177 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 E7ENX8 843 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 FBP2O00757 339 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 PKMP14618 531 aaKnown RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 TCF3P15923 654 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 SERPINA4P29622 427 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 GKP32189 559 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 STK19P49842 368 aaPredicted RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 RHDQ02161 417 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 CREB5Q02930 508 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 CACNG1Q06432 222 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 PTPRNQ16849 979 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 MYLK3Q32MK0 819 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 SAMD4BQ5PRF9 694 aaKnown RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 PDE12Q6L8Q7 609 aaKnown RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 C8orf82Q6P1X6 216 aaPredicted RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 LARP4Q71RC2 724 aaKnown RBP eCLIP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 GRASPQ7Z6J2 395 aaPredicted RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 PAF1Q8N7H5 531 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 PTERQ96BW5 349 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 PHF21BQ96EK2 531 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 BIRC8Q96P09 236 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 MRPS26Q9BYN8 205 aaKnown RBP18.08■□□□□ 0.49
SHISA3-201ENST00000319234 MCOLN1Q9GZU1 580 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 LINC00597Q9H2U6 94 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 TNFRSF12AQ9NP84 129 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 SPHK2Q9NRA0 654 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 DPP7Q9UHL4 492 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 SLC25A13Q9UJS0 675 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 MED16Q9Y2X0 877 aa18.08■□□□□ 0.49
SHISA3-201ENST00000319234 BBIP1A8MTZ0 92 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 ZNF197O14709 1029 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 POU2F2P09086 479 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 CD9P21926 228 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 KCNC1P48547 511 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 STX1BP61266 288 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 HERVK_113P63132 956 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 SETMARQ53H47 684 aaPredicted RBP18.08■□□□□ 0.48
SHISA3-201ENST00000319234 ZNF697Q5TEC3 545 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 C22orf39Q6P5X5 142 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 PCDH20Q8N6Y1 951 aaKnown RBP18.08■□□□□ 0.48
SHISA3-201ENST00000319234 RHEBL1Q8TAI7 183 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 ROPN1LQ96C74 230 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 ZSWIM3Q96MP5 696 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 ERVK-6Q9BXR3 956 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 CEP44Q9C0F1 390 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 TFB2MQ9H5Q4 396 aaKnown RBP18.08■□□□□ 0.48
SHISA3-201ENST00000319234 ZFYVE1Q9HBF4 777 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 UBAP1Q9NZ09 502 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 CD300AQ9UGN4 299 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 CROTQ9UKG9 612 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 PADI4Q9UM07 663 aa18.08■□□□□ 0.48
SHISA3-201ENST00000319234 FNDC3AQ9Y2H6 1198 aaKnown RBP18.08■□□□□ 0.48
SHISA3-201ENST00000319234 AP4S1Q9Y587 144 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms