RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 SEL1L3Q68CR1 1132 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 TMIEQ8NEW7 156 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 OR52B2Q96RD2 323 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 LYSMD1Q96S90 227 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 SHCBP1LQ9BZQ2 653 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 TAS2R13Q9NYV9 303 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 PPM1HQ9ULR3 514 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 OAS3Q9Y6K5 1087 aaKnown RBP22.41■■□□□ 1.18
CDX1-201ENST00000231656 SHISA7A6NL88 538 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 H3BMM5 538 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 GSC2O15499 205 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 NFKB2Q00653 900 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 SLC44A4Q53GD3 710 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 AARS2Q5JTZ9 985 aaKnown RBP22.4■■□□□ 1.18
CDX1-201ENST00000231656 ADHFE1Q8IWW8 467 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 TEX9Q8N6V9 391 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 HCAR2Q8TDS4 363 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 FAM136AQ96C01 138 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 MCCC1Q96RQ3 725 aaPredicted RBP22.4■■□□□ 1.18
CDX1-201ENST00000231656 C19orf43Q9BQ61 176 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 CCDC68Q9H2F9 335 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 DKK3Q9UBP4 350 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 BAIAP2L1Q9UHR4 511 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 NPIPB15A6NHN6 443 aaPredicted RBP22.4■■□□□ 1.18
CDX1-201ENST00000231656 KPNA3O00505 521 aaPredicted RBP22.4■■□□□ 1.18
CDX1-201ENST00000231656 PFDN6O15212 129 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 GYG2O15488 501 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 PKMP14618 531 aaKnown RBP22.4■■□□□ 1.18
CDX1-201ENST00000231656 CD9P21926 228 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 CPA2P48052 419 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 CACNG1Q06432 222 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 OR4D1Q15615 310 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 POM121L1PQ3SYA9 428 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 C2orf27AQ580R0 203 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 CTSL3PQ5NE16 218 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 METTL21CQ5VZV1 264 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 PAQR3Q6TCH7 311 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 USP45Q70EL2 814 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 FAM13CQ8NE31 585 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 RHEBL1Q8TAI7 183 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 PIP4K2CQ8TBX8 421 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 L3HYPDHQ96EM0 354 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 MSANTD3Q96H12 275 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 TFB2MQ9H5Q4 396 aaKnown RBP22.4■■□□□ 1.18
CDX1-201ENST00000231656 SYTL2Q9HCH5 934 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 TCF7L2Q9NQB0 619 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 DUSP12Q9UNI6 340 aa22.4■■□□□ 1.18
CDX1-201ENST00000231656 C1orf232A0A0U1RR37 186 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 C16orf96A6NNT2 1141 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 OR1I1O60431 355 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 IMPDH1P20839 514 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 ADARP55265 1226 aaKnown RBP22.39■■□□□ 1.17
CDX1-201ENST00000231656 ZP2Q05996 745 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 LRRC73Q5JTD7 316 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 TPRG1Q6ZUI0 275 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 KCNV2Q8TDN2 545 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 ERLEC1Q96DZ1 483 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 DERL2Q9GZP9 239 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 GSTO2Q9H4Y5 243 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 ZFYVE1Q9HBF4 777 aa22.39■■□□□ 1.17
CDX1-201ENST00000231656 FNDC3AQ9Y2H6 1198 aaKnown RBP22.39■■□□□ 1.17
CDX1-201ENST00000231656 A8MX80 341 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 B2RBV5 119 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 GAPDHSO14556 408 aaPredicted RBP22.38■■□□□ 1.17
CDX1-201ENST00000231656 TIMP2P16035 220 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 METAP1P53582 386 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 SEMG2Q02383 582 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 FRMD7Q6ZUT3 714 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 DSG4Q86SJ6 1040 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 TSPAN33Q86UF1 283 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 IL17RCQ8NAC3 791 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 FBXO27Q8NI29 283 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 FAM3CQ92520 227 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 PHF21BQ96EK2 531 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 ATOH8Q96SQ7 321 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 GPR21Q99679 349 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 WDR55Q9H6Y2 383 aaPredicted RBP22.38■■□□□ 1.17
CDX1-201ENST00000231656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.38■■□□□ 1.17
CDX1-201ENST00000231656 GALPQ9UBC7 116 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 SMIM24O75264 130 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 WFS1O76024 890 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 CLDN7O95471 211 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 JUNP05412 331 aaKnown RBP22.38■■□□□ 1.17
CDX1-201ENST00000231656 CD72P21854 359 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 NTSR1P30989 418 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 PTGER3P43115 390 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 GALNT1Q10472 559 aaPredicted RBP22.38■■□□□ 1.17
CDX1-201ENST00000231656 CAMK2GQ13555 558 aaPredicted RBP22.38■■□□□ 1.17
CDX1-201ENST00000231656 CRTC1Q6UUV9 634 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 MMAAQ8IVH4 418 aaKnown RBP22.38■■□□□ 1.17
CDX1-201ENST00000231656 NUF2Q9BZD4 464 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 P2RY12Q9H244 342 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 COMMD10Q9Y6G5 202 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 SLC30A1Q9Y6M5 507 aa22.38■■□□□ 1.17
CDX1-201ENST00000231656 UPK3BL1B0FP48 263 aa22.37■■□□□ 1.17
CDX1-201ENST00000231656 TMEM233B4DJY2 109 aa22.37■■□□□ 1.17
CDX1-201ENST00000231656 UPK3BL2E5RIL1 263 aa22.37■■□□□ 1.17
CDX1-201ENST00000231656 E9PBE3 544 aa22.37■■□□□ 1.17
CDX1-201ENST00000231656 GPR39O43194 453 aa22.37■■□□□ 1.17
CDX1-201ENST00000231656 KLHL41O60662 606 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms