RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C UBP10P53874 792 aaPredicted RBP12.94□□□□□ -0.34
LCB1YMR296C TFC6Q06339 672 aa12.94□□□□□ -0.34
LCB1YMR296C TY3A-GQ12173 290 aa12.94□□□□□ -0.34
LCB1YMR296C TY3A-IQ99219 290 aa12.94□□□□□ -0.34
LCB1YMR296C NUC1P08466 329 aa12.93□□□□□ -0.34
LCB1YMR296C DIT2P21595 489 aa12.93□□□□□ -0.34
LCB1YMR296C VMS1Q04311 632 aaKnown RBP12.93□□□□□ -0.34
LCB1YMR296C RPL8BP29453 256 aaKnown RBP12.93□□□□□ -0.34
LCB1YMR296C SIS2P36024 562 aa12.93□□□□□ -0.34
LCB1YMR296C HSP82P02829 709 aaKnown RBP12.92□□□□□ -0.34
LCB1YMR296C RAD18P10862 487 aa12.92□□□□□ -0.34
LCB1YMR296C HCA4P20448 770 aaKnown RBP12.92□□□□□ -0.34
LCB1YMR296C AKR1P39010 764 aa12.92□□□□□ -0.34
LCB1YMR296C TAF13P11747 167 aa12.91□□□□□ -0.34
LCB1YMR296C VMA2P16140 517 aaKnown RBP12.91□□□□□ -0.34
LCB1YMR296C SRP54P20424 541 aaKnown RBP12.91□□□□□ -0.34
LCB1YMR296C EUG1P32474 517 aa12.91□□□□□ -0.34
LCB1YMR296C MPE1P35728 441 aaKnown RBP12.91□□□□□ -0.34
LCB1YMR296C ATG1P53104 897 aa12.91□□□□□ -0.34
LCB1YMR296C ISW2Q08773 1120 aa12.91□□□□□ -0.34
LCB1YMR296C PKC1P24583 1151 aa12.9□□□□□ -0.34
LCB1YMR296C MNN4P36044 1178 aa12.9□□□□□ -0.34
LCB1YMR296C FYV10P40492 516 aa12.9□□□□□ -0.34
LCB1YMR296C YPT11P48559 417 aa12.9□□□□□ -0.34
LCB1YMR296C SES1P07284 462 aaKnown RBP12.89□□□□□ -0.35
LCB1YMR296C PGI1P12709 554 aaKnown RBP12.89□□□□□ -0.35
LCB1YMR296C SDH2P21801 266 aa12.89□□□□□ -0.35
LCB1YMR296C PHO88P38264 188 aaPredicted RBP12.89□□□□□ -0.35
LCB1YMR296C RPN10P38886 268 aaKnown RBP12.89□□□□□ -0.35
LCB1YMR296C VPS45P38932 577 aa12.89□□□□□ -0.35
LCB1YMR296C GPB2P39717 880 aa12.89□□□□□ -0.35
LCB1YMR296C ALD6P54115 500 aaKnown RBP12.89□□□□□ -0.35
LCB1YMR296C SUE1Q06524 206 aa12.89□□□□□ -0.35
LCB1YMR296C TFC8Q12308 588 aa12.89□□□□□ -0.35
LCB1YMR296C CLF1Q12309 687 aaPredicted RBP12.89□□□□□ -0.35
LCB1YMR296C MCM4P30665 933 aaKnown RBP12.88□□□□□ -0.35
LCB1YMR296C RFT1P38206 574 aaPredicted RBP12.88□□□□□ -0.35
LCB1YMR296C CBP3P21560 335 aa12.87□□□□□ -0.35
LCB1YMR296C SRP40P32583 406 aaPredicted RBP12.87□□□□□ -0.35
LCB1YMR296C UTR4P32626 227 aa12.87□□□□□ -0.35
LCB1YMR296C TMA64Q04600 565 aaKnown RBP12.87□□□□□ -0.35
LCB1YMR296C UTP4Q06679 776 aaKnown RBP12.87□□□□□ -0.35
LCB1YMR296C YOR111WQ99210 232 aa12.87□□□□□ -0.35
LCB1YMR296C SAM1P10659 382 aaKnown RBP12.86□□□□□ -0.35
LCB1YMR296C SWI4P25302 1093 aaKnown RBP12.86□□□□□ -0.35
LCB1YMR296C TGL1P34163 548 aa12.86□□□□□ -0.35
LCB1YMR296C PSF2P40359 213 aa12.86□□□□□ -0.35
LCB1YMR296C ALG2P43636 503 aa12.86□□□□□ -0.35
LCB1YMR296C DCS2Q12123 353 aa12.86□□□□□ -0.35
LCB1YMR296C CDC6P09119 513 aa12.86□□□□□ -0.35
LCB1YMR296C RGP1P16664 663 aa12.86□□□□□ -0.35
LCB1YMR296C RRM3P38766 723 aa12.86□□□□□ -0.35
LCB1YMR296C MDM1Q01846 1127 aa12.86□□□□□ -0.35
LCB1YMR296C HXK1P04806 485 aaKnown RBP12.85□□□□□ -0.35
LCB1YMR296C CYC8P14922 966 aa12.85□□□□□ -0.35
LCB1YMR296C VPS1P21576 704 aaKnown RBP12.85□□□□□ -0.35
LCB1YMR296C DUS4Q06063 367 aa12.85□□□□□ -0.35
LCB1YMR296C DSE3Q08729 430 aa12.85□□□□□ -0.35
LCB1YMR296C GSY2P27472 705 aa12.84□□□□□ -0.35
LCB1YMR296C YKR018CP36114 725 aa12.84□□□□□ -0.35
LCB1YMR296C YAF9P53930 226 aa12.84□□□□□ -0.35
LCB1YMR296C ULP1Q02724 621 aa12.84□□□□□ -0.35
LCB1YMR296C CSC1Q06538 782 aa12.84□□□□□ -0.35
LCB1YMR296C PIB1Q06651 286 aa12.84□□□□□ -0.35
LCB1YMR296C BMH2P34730 273 aaKnown RBP12.83□□□□□ -0.35
LCB1YMR296C PAM1P37304 830 aaKnown RBP12.83□□□□□ -0.35
LCB1YMR296C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.83□□□□□ -0.35not detected
LCB1YMR296C RNR3P21672 869 aaKnown RBP12.83□□□□□ -0.36
LCB1YMR296C YKT6P36015 200 aaKnown RBP12.83□□□□□ -0.36
LCB1YMR296C MAL31P38156 614 aa12.83□□□□□ -0.36
LCB1YMR296C NDT80P38830 627 aa12.83□□□□□ -0.36
LCB1YMR296C MXR1P40029 184 aa12.83□□□□□ -0.36
LCB1YMR296C SPH1Q06160 661 aa12.83□□□□□ -0.36
LCB1YMR296C MYO1P08964 1928 aa12.82□□□□□ -0.36
LCB1YMR296C CDC19P00549 500 aaKnown RBP12.82□□□□□ -0.36
LCB1YMR296C SHP1P34223 423 aa12.82□□□□□ -0.36
LCB1YMR296C YGR125WP53273 1036 aa12.82□□□□□ -0.36
LCB1YMR296C URA1P28272 314 aaPredicted RBP12.81□□□□□ -0.36
LCB1YMR296C NOC2P39744 710 aaKnown RBP12.81□□□□□ -0.36
LCB1YMR296C LSB1P53281 241 aa12.81□□□□□ -0.36
LCB1YMR296C WAR1Q03631 944 aa12.81□□□□□ -0.36
LCB1YMR296C GET3Q12154 354 aaKnown RBP12.81□□□□□ -0.36
LCB1YMR296C PRE10P21242 288 aaKnown RBP RIP-Chip data12.8□□□□□ -0.36not detected
LCB1YMR296C PAH1P32567 862 aa12.8□□□□□ -0.36
LCB1YMR296C MNR2P35724 969 aa12.8□□□□□ -0.36
LCB1YMR296C BUL2Q03758 920 aaKnown RBP12.8□□□□□ -0.36
LCB1YMR296C DUS3Q06053 668 aaKnown RBP12.8□□□□□ -0.36
LCB1YMR296C PHR1P05066 565 aaKnown RBP RIP-Chip data12.8□□□□□ -0.36not detected
LCB1YMR296C TOM71P38825 639 aaKnown RBP12.8□□□□□ -0.36
LCB1YMR296C TCB2P48231 1178 aa12.8□□□□□ -0.36
LCB1YMR296C ESC2Q06340 456 aa12.8□□□□□ -0.36
LCB1YMR296C ICL2Q12031 575 aa12.8□□□□□ -0.36
LCB1YMR296C MFT1P33441 392 aaKnown RBP12.79□□□□□ -0.36
LCB1YMR296C VPS29P38759 282 aa12.79□□□□□ -0.36
LCB1YMR296C FMS1P50264 508 aa12.79□□□□□ -0.36
LCB1YMR296C MET7Q08645 548 aa12.79□□□□□ -0.36
LCB1YMR296C RGT1P32862 1170 aa12.78□□□□□ -0.36
LCB1YMR296C MCR1P36060 302 aaKnown RBP12.78□□□□□ -0.36
LCB1YMR296C PSY4P38193 441 aa12.78□□□□□ -0.36
LCB1YMR296C RXT2P38255 430 aa12.78□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms