RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W MAK11P20484 414 aaKnown RBP8.88□□□□□ -0.99
SHC1YER096W TPS3P38426 1054 aaKnown RBP8.88□□□□□ -0.99
SHC1YER096W NPR3P38742 1146 aa8.88□□□□□ -0.99
SHC1YER096W TOM71P38825 639 aaKnown RBP8.88□□□□□ -0.99
SHC1YER096W YER130CP39959 443 aa8.88□□□□□ -0.99
SHC1YER096W LYS14P40971 790 aa8.88□□□□□ -0.99
SHC1YER096W CSC1Q06538 782 aa8.88□□□□□ -0.99
SHC1YER096W VPS45P38932 577 aa8.87□□□□□ -0.99
SHC1YER096W YPT11P48559 417 aa8.87□□□□□ -0.99
SHC1YER096W RSC1P53236 928 aa8.87□□□□□ -0.99
SHC1YER096W VMS1Q04311 632 aaKnown RBP8.87□□□□□ -0.99
SHC1YER096W SMD2Q06217 110 aaKnown RBP8.87□□□□□ -0.99
SHC1YER096W TFC8Q12308 588 aa8.87□□□□□ -0.99
SHC1YER096W TOM1Q03280 3268 aa8.87□□□□□ -0.99
SHC1YER096W GAL2P13181 574 aa8.86□□□□□ -0.99
SHC1YER096W SSA4P22202 642 aaKnown RBP8.86□□□□□ -0.99
SHC1YER096W YKR023WP36119 530 aaKnown RBP8.86□□□□□ -0.99
SHC1YER096W RSM25P40496 264 aa8.86□□□□□ -0.99
SHC1YER096W CIT3P43635 486 aa8.86□□□□□ -0.99
SHC1YER096W UTP4Q06679 776 aaKnown RBP8.86□□□□□ -0.99
SHC1YER096W FBP1P09201 348 aa8.85□□□□□ -0.99
SHC1YER096W ASF1P32447 279 aa8.85□□□□□ -0.99
SHC1YER096W SRP40P32583 406 aaPredicted RBP8.85□□□□□ -0.99
SHC1YER096W FYV10P40492 516 aa8.85□□□□□ -0.99
SHC1YER096W YIL089WP40500 205 aa8.85□□□□□ -0.99
SHC1YER096W YML037CQ03703 340 aa8.85□□□□□ -0.99
SHC1YER096W VIP1Q06685 1146 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W PHR1P05066 565 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
SHC1YER096W YDJ1P25491 409 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W STT3P39007 718 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W CCT3P39077 534 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W PES4P39684 611 aa8.85□□□□□ -0.99
SHC1YER096W YGR153WP48238 217 aa8.85□□□□□ -0.99
SHC1YER096W CUE3P53137 624 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W CWC15Q03772 175 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W TRS120Q04183 1289 aa8.85□□□□□ -0.99
SHC1YER096W EIS1Q05050 843 aaKnown RBP8.85□□□□□ -0.99
SHC1YER096W CEX1Q12453 761 aa8.85□□□□□ -0.99
SHC1YER096W ALG1P16661 449 aa8.84□□□□□ -0.99
SHC1YER096W MCM3P24279 971 aaKnown RBP8.84□□□□□ -0.99
SHC1YER096W PHO88P38264 188 aaPredicted RBP8.84□□□□□ -0.99
SHC1YER096W RET3P53600 189 aa8.84□□□□□ -0.99
SHC1YER096W SGD1Q06132 899 aa8.84□□□□□ -0.99
SHC1YER096W MMR1Q06324 491 aa8.84□□□□□ -0.99
SHC1YER096W YOR296WQ08748 1289 aa8.84□□□□□ -0.99
SHC1YER096W GIN4Q12263 1142 aa8.84□□□□□ -0.99
SHC1YER096W ERG12P07277 443 aa8.83□□□□□ -1
SHC1YER096W PAN5P38787 379 aa8.83□□□□□ -1
SHC1YER096W ATG32P40458 529 aa8.83□□□□□ -1
SHC1YER096W CTR1P49573 406 aa8.83□□□□□ -1
SHC1YER096W YGR273CP53329 174 aa8.83□□□□□ -1
SHC1YER096W TMA64Q04600 565 aaKnown RBP8.83□□□□□ -1
SHC1YER096W THR4P16120 514 aaKnown RBP8.82□□□□□ -1
SHC1YER096W ATE1P16639 503 aa8.82□□□□□ -1
SHC1YER096W YJL007CP47080 104 aa8.82□□□□□ -1
SHC1YER096W DSE4P53753 1117 aa8.82□□□□□ -1
SHC1YER096W FAR11P53917 953 aa8.82□□□□□ -1
SHC1YER096W AIM33Q04516 312 aa8.82□□□□□ -1
SHC1YER096W TIP41Q12199 356 aa8.82□□□□□ -1
SHC1YER096W RAD18P10862 487 aa8.81□□□□□ -1
SHC1YER096W RPL8AP17076 256 aaKnown RBP8.81□□□□□ -1
SHC1YER096W TGL1P34163 548 aa8.81□□□□□ -1
SHC1YER096W YKT6P36015 200 aaKnown RBP8.81□□□□□ -1
SHC1YER096W GAA1P39012 614 aa8.81□□□□□ -1
SHC1YER096W FMS1P50264 508 aa8.81□□□□□ -1
SHC1YER096W SOL4P53315 255 aa8.81□□□□□ -1
SHC1YER096W UBX5Q06682 500 aa8.81□□□□□ -1
SHC1YER096W OXR1Q08952 273 aa8.81□□□□□ -1
SHC1YER096W NBL1Q3E7Y6 73 aa8.81□□□□□ -1
SHC1YER096W TUF1P02992 437 aaKnown RBP8.8□□□□□ -1
SHC1YER096W SAM1P10659 382 aaKnown RBP8.8□□□□□ -1
SHC1YER096W SUL1P38359 859 aa8.8□□□□□ -1
SHC1YER096W ERG7P38604 731 aa8.8□□□□□ -1
SHC1YER096W BNI5P53890 448 aaKnown RBP8.8□□□□□ -1
SHC1YER096W LCD1Q04377 747 aa8.8□□□□□ -1
SHC1YER096W SLK19Q08581 821 aaKnown RBP8.8□□□□□ -1
SHC1YER096W HIS4P00815 799 aaKnown RBP8.8□□□□□ -1
SHC1YER096W GSY2P27472 705 aa8.8□□□□□ -1
SHC1YER096W BMH1P29311 267 aaKnown RBP8.8□□□□□ -1
SHC1YER096W UGA4P32837 571 aa8.8□□□□□ -1
SHC1YER096W SAS3P34218 831 aa8.8□□□□□ -1
SHC1YER096W DAK2P43550 591 aa8.8□□□□□ -1
SHC1YER096W PEX21P50091 288 aa8.8□□□□□ -1
SHC1YER096W LSB1P53281 241 aa8.8□□□□□ -1
SHC1YER096W ADY4Q05955 493 aa8.8□□□□□ -1
SHC1YER096W PSR2Q07949 397 aa8.8□□□□□ -1
SHC1YER096W SHP1P34223 423 aa8.79□□□□□ -1
SHC1YER096W OCT1P35999 772 aa8.79□□□□□ -1
SHC1YER096W PSY4P38193 441 aa8.79□□□□□ -1
SHC1YER096W TPM2P40414 161 aa8.79□□□□□ -1
SHC1YER096W BRE2P43132 505 aa8.79□□□□□ -1
SHC1YER096W YLR326WQ06170 240 aaKnown RBP8.79□□□□□ -1
SHC1YER096W SUB2Q07478 446 aaKnown RBP8.79□□□□□ -1
SHC1YER096W WHI4Q07655 649 aaKnown RBP8.79□□□□□ -1
SHC1YER096W ETT1Q08421 412 aaKnown RBP8.79□□□□□ -1
SHC1YER096W ORC6P38826 435 aa8.78□□□□□ -1
SHC1YER096W UBA2P52488 636 aa8.78□□□□□ -1
SHC1YER096W SDA1P53313 767 aaKnown RBP8.78□□□□□ -1
SHC1YER096W CDC15P27636 974 aa8.77□□□□□ -1.01
SHC1YER096W SEC20P28791 383 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms