RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIZ1	YDR409W	CAN1	P04817	590 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	PHO8	P11491	566 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	HAP4	P14064	554 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	MEF1	P25039	761 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	HIR1	P32479	840 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	GCD7	P32502	381 aa	Predicted RBP	3.74	□□□□□ -1.81
SIZ1	YDR409W	TIF4632	P39936	914 aa	Known RBP	3.74	□□□□□ -1.81
SIZ1	YDR409W	SCY1	P53009	804 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	TYW3	P53177	273 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	HOL1	P53389	586 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	SSL2	Q00578	843 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	RMD1	Q03441	430 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	LEU2	P04173	364 aa	Predicted RBP	3.74	□□□□□ -1.81
SIZ1	YDR409W	TRM1	P15565	570 aa	Known RBP	3.74	□□□□□ -1.81
SIZ1	YDR409W	DID4	P36108	232 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	SLI15	P38283	698 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	MED8	P38304	223 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	MGE1	P38523	228 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	NPR3	P38742	1146 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	MAM1	P40065	302 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	MSH4	P40965	878 aa	Predicted RBP	3.74	□□□□□ -1.81
SIZ1	YDR409W	YGR250C	P53316	781 aa	Known RBP	3.74	□□□□□ -1.81
SIZ1	YDR409W	TIM50	Q02776	476 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	YPR109W	Q06104	294 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	SAM3	Q08986	587 aa		3.74	□□□□□ -1.81
SIZ1	YDR409W	ATP4	P05626	244 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	CDC34	P14682	295 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	OPI1	P21957	404 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	MBR1	P23493	339 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	CLB5	P30283	435 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	PLC1	P32383	869 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	STO1	P34160	861 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	GRX7	P38068	203 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	AKL1	P38080	1108 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	ECM1	P39715	212 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	SEC26	P41810	973 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	MTR4	P47047	1073 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	YNL058C	P53947	316 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	SPO20	Q04359	397 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	SDH5	Q08230	162 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	SRF1	Q12516	437 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	HOM3	P10869	527 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	NAT1	P12945	854 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	SRM1	P21827	482 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	MSH1	P25846	959 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	PIC2	P40035	300 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	CCT5	P40413	562 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	MRS2	Q01926	470 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	RRP9	Q06506	573 aa	Known RBP	3.73	□□□□□ -1.81
SIZ1	YDR409W	OPI10	Q08202	246 aa		3.73	□□□□□ -1.81
SIZ1	YDR409W	RRP5	Q05022	1729 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	COB	P00163	385 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	MSH2	P25847	964 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	DEP1	P31385	405 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	SPC110	P32380	944 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	MNR2	P35724	969 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	SEA4	P38164	1038 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	YBR071W	P38243	211 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	PRP43	P53131	767 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	MDM1	Q01846	1127 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	UTP13	Q05946	817 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	YOR238W	Q08634	303 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	ADR1	P07248	1323 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	FRS2	P15625	503 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	UBP1	P25037	809 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	NTH2	P35172	780 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	YBR197C	P38306	217 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	AIM9	P40053	627 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	ESL1	P40456	1118 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	SML1	Q04964	104 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	MPD2	Q99316	277 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	URB1	P34241	1764 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	CCP1	P00431	361 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	GAL1	P04385	528 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	VAS1	P07806	1104 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	PET111	P08468	800 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	PRI2	P20457	528 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	EUG1	P32474	517 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	DUR3	P33413	735 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	MFT1	P33441	392 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	MUM2	P38236	366 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	HXT15	P54854	567 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	RNT1	Q02555	471 aa		3.72	□□□□□ -1.81
SIZ1	YDR409W	BMS1	Q08965	1183 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	DBP10	Q12389	995 aa	Known RBP	3.72	□□□□□ -1.81
SIZ1	YDR409W	YIL177C	P40434	1758 aa		3.71	□□□□□ -1.82
SIZ1	YDR409W	YJL225C	P40889	1758 aa		3.71	□□□□□ -1.82
SIZ1	YDR409W	RNA1	P11745	407 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	PGI1	P12709	554 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	URA1	P28272	314 aa	Predicted RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	YGL082W	P53155	381 aa		3.71	□□□□□ -1.82
SIZ1	YDR409W	IMH1	Q06704	911 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	ETT1	Q08421	412 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	PGA3	Q12746	312 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	RPL19A	P0CX82	189 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	RPL19B	P0CX83	189 aa	Predicted RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	CLB1	P24868	471 aa		3.71	□□□□□ -1.82
SIZ1	YDR409W	RAD24	P32641	659 aa		3.71	□□□□□ -1.82
SIZ1	YDR409W	MAP2	P38174	421 aa	Known RBP	3.71	□□□□□ -1.82
SIZ1	YDR409W	FIG4	P42837	879 aa		3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 270.1 ms