RNA–Protein interactions for RNA: ENST00000641704.1

CASC19-252, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,313 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-252ENST00000641704 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
CASC19-252ENST00000641704 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
CASC19-252ENST00000641704 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
CASC19-252ENST00000641704 NLRP2Q9NX02 1062 aa10.67□□□□□ -0.7
CASC19-252ENST00000641704 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
CASC19-252ENST00000641704 TOM1L2Q6ZVM7 507 aa10.66□□□□□ -0.7
CASC19-252ENST00000641704 EYA1Q99502 592 aa10.66□□□□□ -0.7
CASC19-252ENST00000641704 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
CASC19-252ENST00000641704 COL14A1Q05707 1796 aaKnown RBP10.66□□□□□ -0.7
CASC19-252ENST00000641704 FAM208AQ9UK61 1670 aaKnown RBP10.66□□□□□ -0.7
CASC19-252ENST00000641704 PLEKHG2Q9H7P9 1386 aa10.65□□□□□ -0.7
CASC19-252ENST00000641704 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
CASC19-252ENST00000641704 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
CASC19-252ENST00000641704 RAPGEF4Q8WZA2 1011 aa10.65□□□□□ -0.7
CASC19-252ENST00000641704 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
CASC19-252ENST00000641704 KDRP35968 1356 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 APAF1O14727 1248 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 TCP11L2Q8N4U5 519 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 BTG4Q9NY30 223 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 AXIN2Q9Y2T1 843 aa10.64□□□□□ -0.71
CASC19-252ENST00000641704 COL5A2P05997 1499 aaPredicted RBP10.64□□□□□ -0.71
CASC19-252ENST00000641704 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
CASC19-252ENST00000641704 TATP17735 454 aaPredicted RBP10.63□□□□□ -0.71
CASC19-252ENST00000641704 FBXO41Q8TF61 875 aa10.63□□□□□ -0.71
CASC19-252ENST00000641704 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
CASC19-252ENST00000641704 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
CASC19-252ENST00000641704 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 NFE2L2Q16236 605 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 CCDC27Q2M243 656 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 PLEKHO1Q53GL0 409 aaPredicted RBP10.62□□□□□ -0.71
CASC19-252ENST00000641704 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 RTF1Q92541 710 aaKnown RBP10.62□□□□□ -0.71
CASC19-252ENST00000641704 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 C8orf37Q96NL8 207 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 CARD10Q9BWT7 1032 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
CASC19-252ENST00000641704 LMO7Q8WWI1 1683 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 CRB1P82279 1406 aa10.62□□□□□ -0.71
CASC19-252ENST00000641704 TMPOP42166 694 aaKnown RBP10.61□□□□□ -0.71
CASC19-252ENST00000641704 RIPK4P57078 832 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 USHBP1Q8N6Y0 703 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 COL18A1P39060 1754 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 NCAPD2Q15021 1401 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 CAMTA1Q9Y6Y1 1673 aa10.61□□□□□ -0.71
CASC19-252ENST00000641704 C1orf141Q5JVX7 400 aa10.6□□□□□ -0.71
CASC19-252ENST00000641704 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
CASC19-252ENST00000641704 THRAP3Q9Y2W1 955 aaKnown RBP10.6□□□□□ -0.71
CASC19-252ENST00000641704 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
CASC19-252ENST00000641704 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
CASC19-252ENST00000641704 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
CASC19-252ENST00000641704 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
CASC19-252ENST00000641704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.717e-8■□□□□ 10.2
CASC19-252ENST00000641704 E9PSI1 815 aa10.58□□□□□ -0.71
CASC19-252ENST00000641704 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.71
CASC19-252ENST00000641704 IL2RBP14784 551 aa10.58□□□□□ -0.71
CASC19-252ENST00000641704 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.71
CASC19-252ENST00000641704 UNC5CLQ8IV45 518 aa10.58□□□□□ -0.71
CASC19-252ENST00000641704 MYH16Q9H6N6 1097 aa10.58□□□□□ -0.71
CASC19-252ENST00000641704 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.71
CASC19-252ENST00000641704 NWD2Q9ULI1 1742 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 SLIT2O94813 1529 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 PLCH1Q4KWH8 1693 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 POTEMA6NI47 508 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 GNAT3A8MTJ3 354 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 ZNF530Q6P9A1 599 aaPredicted RBP10.58□□□□□ -0.72
CASC19-252ENST00000641704 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 USP21Q9UK80 565 aa10.58□□□□□ -0.72
CASC19-252ENST00000641704 MTHFSDQ2M296 383 aaKnown RBP10.57□□□□□ -0.72
CASC19-252ENST00000641704 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
CASC19-252ENST00000641704 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
CASC19-252ENST00000641704 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
CASC19-252ENST00000641704 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
CASC19-252ENST00000641704 IL16Q14005 1332 aa10.57□□□□□ -0.72
CASC19-252ENST00000641704 PCDH11XQ9BZA7 1347 aa10.57□□□□□ -0.72
CASC19-252ENST00000641704 PCDH11YQ9BZA8 1340 aa10.57□□□□□ -0.72
CASC19-252ENST00000641704 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
CASC19-252ENST00000641704 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
CASC19-252ENST00000641704 VPS72Q15906 364 aa10.56□□□□□ -0.72
CASC19-252ENST00000641704 IFNL2Q8IZJ0 200 aa10.56□□□□□ -0.72
CASC19-252ENST00000641704 OVOS2A0A0G2JMS6 1433 aa10.56□□□□□ -0.72
CASC19-252ENST00000641704 LRP6O75581 1613 aa10.56□□□□□ -0.72
CASC19-252ENST00000641704 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
CASC19-252ENST00000641704 AFF2P51816 1311 aa10.55□□□□□ -0.72
CASC19-252ENST00000641704 SENP3-EIF4A1A0A087X0R7 540 aa10.55□□□□□ -0.72
CASC19-252ENST00000641704 GNAI1P63096 354 aa10.55□□□□□ -0.72
CASC19-252ENST00000641704 ZCRB1Q8TBF4 217 aaKnown RBP10.55□□□□□ -0.72
CASC19-252ENST00000641704 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
CASC19-252ENST00000641704 SPATA31A1Q5TZJ5 1347 aa10.54□□□□□ -0.72
CASC19-252ENST00000641704 SPATA31A5Q5VU36 1347 aa10.54□□□□□ -0.72
CASC19-252ENST00000641704 SPATA31A7Q8IWB4 1347 aa10.54□□□□□ -0.72
CASC19-252ENST00000641704 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
CASC19-252ENST00000641704 TEFQ10587 303 aa10.54□□□□□ -0.72
CASC19-252ENST00000641704 ZNF772Q68DY9 489 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms