RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 KIF24Q5T7B8 1368 aa8.76□□□□□ -1.01
CASC19-246ENST00000641625 PARP4Q9UKK3 1724 aaKnown RBP8.76□□□□□ -1.01
CASC19-246ENST00000641625 TNNT2P45379 298 aaPredicted RBP8.76□□□□□ -1.01
CASC19-246ENST00000641625 HSP90AB2PQ58FF8 381 aa8.76□□□□□ -1.01
CASC19-246ENST00000641625 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
CASC19-246ENST00000641625 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
CASC19-246ENST00000641625 IL2RBP14784 551 aa8.75□□□□□ -1.01
CASC19-246ENST00000641625 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
CASC19-246ENST00000641625 LRRC37A3O60309 1634 aa8.75□□□□□ -1.01
CASC19-246ENST00000641625 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
CASC19-246ENST00000641625 INSRP06213 1382 aa8.75□□□□□ -1.01
CASC19-246ENST00000641625 TRIM37O94972 964 aa8.74□□□□□ -1.01
CASC19-246ENST00000641625 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.74□□□□□ -1.01
CASC19-246ENST00000641625 POLKQ9UBT6 870 aa8.74□□□□□ -1.01
CASC19-246ENST00000641625 OVOS2A0A0G2JMS6 1433 aa8.74□□□□□ -1.01
CASC19-246ENST00000641625 TNS2Q63HR2 1409 aa8.74□□□□□ -1.01
CASC19-246ENST00000641625 PEAK1Q9H792 1746 aa8.73□□□□□ -1.01
CASC19-246ENST00000641625 EXOC5O00471 708 aa8.73□□□□□ -1.01
CASC19-246ENST00000641625 NBPF6Q5VWK0 638 aa8.73□□□□□ -1.01
CASC19-246ENST00000641625 MORC1Q86VD1 984 aa8.73□□□□□ -1.01
CASC19-246ENST00000641625 MARCH10Q8NA82 808 aaPredicted RBP8.73□□□□□ -1.01
CASC19-246ENST00000641625 NBPF4Q96M43 638 aa8.73□□□□□ -1.01
CASC19-246ENST00000641625 PER1O15534 1290 aaPredicted RBP8.72□□□□□ -1.01
CASC19-246ENST00000641625 BAG6P46379 1132 aa8.72□□□□□ -1.01
CASC19-246ENST00000641625 USHBP1Q8N6Y0 703 aa8.72□□□□□ -1.01
CASC19-246ENST00000641625 WNK3Q9BYP7 1800 aa8.72□□□□□ -1.01
CASC19-246ENST00000641625 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
CASC19-246ENST00000641625 FAM208AQ9UK61 1670 aaKnown RBP8.71□□□□□ -1.01
CASC19-246ENST00000641625 BCL9O00512 1426 aa8.71□□□□□ -1.01
CASC19-246ENST00000641625 MEGF6O75095 1541 aa8.71□□□□□ -1.01
CASC19-246ENST00000641625 BBXQ8WY36 941 aaPredicted RBP8.71□□□□□ -1.02
CASC19-246ENST00000641625 ANKRD26Q9UPS8 1709 aa8.7□□□□□ -1.02
CASC19-246ENST00000641625 APBA3O96018 575 aa8.7□□□□□ -1.02
CASC19-246ENST00000641625 CC2D1BQ5T0F9 858 aaKnown RBP8.7□□□□□ -1.02
CASC19-246ENST00000641625 RAPGEF4Q8WZA2 1011 aa8.7□□□□□ -1.02
CASC19-246ENST00000641625 RGPD1P0DJD0 1748 aa8.7□□□□□ -1.02
CASC19-246ENST00000641625 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
CASC19-246ENST00000641625 PTF1AQ7RTS3 328 aa8.69□□□□□ -1.02
CASC19-246ENST00000641625 DDX54Q8TDD1 881 aaKnown RBP8.69□□□□□ -1.02
CASC19-246ENST00000641625 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
CASC19-246ENST00000641625 TNS1Q9HBL0 1735 aaKnown RBP8.69□□□□□ -1.02
CASC19-246ENST00000641625 NPC1L1Q9UHC9 1359 aa8.69□□□□□ -1.02
CASC19-246ENST00000641625 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
CASC19-246ENST00000641625 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
CASC19-246ENST00000641625 AKT1S1Q96B36 256 aa8.69□□□□□ -1.02
CASC19-246ENST00000641625 CAMKK2Q96RR4 588 aa8.69□□□□□ -1.02
CASC19-246ENST00000641625 EYA1Q99502 592 aa8.69□□□□□ -1.02
CASC19-246ENST00000641625 RGPD2P0DJD1 1756 aa8.68□□□□□ -1.02
CASC19-246ENST00000641625 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
CASC19-246ENST00000641625 VASPP50552 380 aaPredicted RBP8.68□□□□□ -1.02
CASC19-246ENST00000641625 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
CASC19-246ENST00000641625 EZH2Q15910 746 aaKnown RBP8.68□□□□□ -1.02
CASC19-246ENST00000641625 PAXIP1Q6ZW49 1069 aaPredicted RBP8.68□□□□□ -1.02
CASC19-246ENST00000641625 MAP2P11137 1827 aaKnown RBP8.68□□□□□ -1.02
CASC19-246ENST00000641625 NCAPD2Q15021 1401 aa8.68□□□□□ -1.02
CASC19-246ENST00000641625 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
CASC19-246ENST00000641625 HAX1O00165 279 aa8.67□□□□□ -1.02
CASC19-246ENST00000641625 KCNQ2O43526 872 aa8.67□□□□□ -1.02
CASC19-246ENST00000641625 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
CASC19-246ENST00000641625 MTHFSP49914 203 aa8.66□□□□□ -1.02
CASC19-246ENST00000641625 IGSF1Q8N6C5 1336 aa8.66□□□□□ -1.02
CASC19-246ENST00000641625 PCDH11XQ9BZA7 1347 aa8.66□□□□□ -1.02
CASC19-246ENST00000641625 PCDH11YQ9BZA8 1340 aa8.66□□□□□ -1.02
CASC19-246ENST00000641625 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
CASC19-246ENST00000641625 PLSCR1O15162 318 aa8.65□□□□□ -1.03
CASC19-246ENST00000641625 CYP27B1O15528 508 aa8.65□□□□□ -1.03
CASC19-246ENST00000641625 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.03
CASC19-246ENST00000641625 CFAP44Q96MT7 982 aa8.65□□□□□ -1.03
CASC19-246ENST00000641625 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
CASC19-246ENST00000641625 IL13P35225 146 aa8.64□□□□□ -1.03
CASC19-246ENST00000641625 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
CASC19-246ENST00000641625 SYTL4Q96C24 671 aaPredicted RBP8.64□□□□□ -1.03
CASC19-246ENST00000641625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.64□□□□□ -1.037e-8■□□□□ 10.2
CASC19-246ENST00000641625 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
CASC19-246ENST00000641625 NHSQ6T4R5 1651 aa8.64□□□□□ -1.03
CASC19-246ENST00000641625 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
CASC19-246ENST00000641625 PRIM1P49642 420 aaKnown RBP8.63□□□□□ -1.03
CASC19-246ENST00000641625 R3HDM1Q15032 1099 aaKnown RBP8.63□□□□□ -1.03
CASC19-246ENST00000641625 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
CASC19-246ENST00000641625 PROM2Q8N271 834 aa8.63□□□□□ -1.03
CASC19-246ENST00000641625 SHANK3Q9BYB0 1731 aa8.63□□□□□ -1.03
CASC19-246ENST00000641625 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
CASC19-246ENST00000641625 SULT6B1Q6IMI4 303 aa8.62□□□□□ -1.03
CASC19-246ENST00000641625 KDRP35968 1356 aa8.62□□□□□ -1.03
CASC19-246ENST00000641625 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
CASC19-246ENST00000641625 DIAPH1O60610 1272 aaKnown RBP8.62□□□□□ -1.03
CASC19-246ENST00000641625 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
CASC19-246ENST00000641625 REM2Q8IYK8 340 aaPredicted RBP8.62□□□□□ -1.03
CASC19-246ENST00000641625 RREB1Q92766 1687 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 PKD1L3Q7Z443 1732 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 RGPD3A6NKT7 1758 aaPredicted RBP8.61□□□□□ -1.03
CASC19-246ENST00000641625 RGPD4Q7Z3J3 1758 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 PHKG2P15735 406 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
CASC19-246ENST00000641625 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 IFNL2Q8IZJ0 200 aa8.61□□□□□ -1.03
CASC19-246ENST00000641625 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
CASC19-246ENST00000641625 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
CASC19-246ENST00000641625 DOT1LQ8TEK3 1739 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms