RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MRPL50Q8N5N7 158 aaKnown RBP16.69■□□□□ 0.26
SCARB2-227ENST00000640957 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
SCARB2-227ENST00000640957 CNPY2Q9Y2B0 182 aa16.69■□□□□ 0.26
SCARB2-227ENST00000640957 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
SCARB2-227ENST00000640957 TRIM6-TRIM34B2RNG4 842 aa16.69■□□□□ 0.26
SCARB2-227ENST00000640957 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-227ENST00000640957 MTERF4Q7Z6M4 381 aaKnown RBP16.69■□□□□ 0.26
SCARB2-227ENST00000640957 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCARB2-227ENST00000640957 V9GYY5 206 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-227ENST00000640957 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-227ENST00000640957 ZNF592Q92610 1267 aa16.68■□□□□ 0.26
SCARB2-227ENST00000640957 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
SCARB2-227ENST00000640957 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
SCARB2-227ENST00000640957 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
SCARB2-227ENST00000640957 NPATQ14207 1427 aa16.67■□□□□ 0.26
SCARB2-227ENST00000640957 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
SCARB2-227ENST00000640957 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
SCARB2-227ENST00000640957 FYB1O15117 783 aa16.67■□□□□ 0.26
SCARB2-227ENST00000640957 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
SCARB2-227ENST00000640957 ZFYVE16Q7Z3T8 1539 aa16.67■□□□□ 0.26
SCARB2-227ENST00000640957 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
SCARB2-227ENST00000640957 AP5Z1O43299 807 aa16.66■□□□□ 0.26
SCARB2-227ENST00000640957 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
SCARB2-227ENST00000640957 PIBF1Q8WXW3 757 aa16.66■□□□□ 0.26
SCARB2-227ENST00000640957 CWC22Q9HCG8 908 aaKnown RBP16.66■□□□□ 0.26
SCARB2-227ENST00000640957 CPA1P15085 419 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
SCARB2-227ENST00000640957 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
SCARB2-227ENST00000640957 MEIS3Q99687 375 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 F6X3S4 739 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 ZBTB9Q96C00 473 aa16.65■□□□□ 0.26
SCARB2-227ENST00000640957 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
SCARB2-227ENST00000640957 MCM5P33992 734 aa16.64■□□□□ 0.25
SCARB2-227ENST00000640957 CAMK4Q16566 473 aa16.64■□□□□ 0.25
SCARB2-227ENST00000640957 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
SCARB2-227ENST00000640957 TRPM2O94759 1503 aa16.64■□□□□ 0.25
SCARB2-227ENST00000640957 MBD3O95983 291 aa16.64■□□□□ 0.25
SCARB2-227ENST00000640957 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-227ENST00000640957 LRMPQ12912 555 aa16.63■□□□□ 0.25
SCARB2-227ENST00000640957 ERC2O15083 957 aa16.62■□□□□ 0.25
SCARB2-227ENST00000640957 PDE4CQ08493 712 aa16.62■□□□□ 0.25
SCARB2-227ENST00000640957 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
SCARB2-227ENST00000640957 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
SCARB2-227ENST00000640957 REC8O95072 547 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 CEP152O94986 1710 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 BRD1O95696 1058 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 PTGS1P23219 599 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 NME9Q86XW9 330 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
SCARB2-227ENST00000640957 LAMC1P11047 1609 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCARB2-227ENST00000640957 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 CHAF1AQ13111 956 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-227ENST00000640957 SYAP1Q96A49 352 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-227ENST00000640957 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
SCARB2-227ENST00000640957 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
SCARB2-227ENST00000640957 UTP14CQ5TAP6 766 aaKnown RBP16.59■□□□□ 0.25
SCARB2-227ENST00000640957 IL25Q9H293 177 aa16.59■□□□□ 0.25
SCARB2-227ENST00000640957 IFT57Q9NWB7 429 aa16.59■□□□□ 0.25
SCARB2-227ENST00000640957 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
SCARB2-227ENST00000640957 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
SCARB2-227ENST00000640957 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.25
SCARB2-227ENST00000640957 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.25
SCARB2-227ENST00000640957 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 UNC5CLQ8IV45 518 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 ST7Q9NRC1 585 aa16.58■□□□□ 0.24
SCARB2-227ENST00000640957 KCNJ4P48050 445 aa16.57■□□□□ 0.24
SCARB2-227ENST00000640957 CEBPAP49715 358 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-227ENST00000640957 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-227ENST00000640957 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
SCARB2-227ENST00000640957 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
SCARB2-227ENST00000640957 RPGRIP1LQ68CZ1 1315 aa16.57■□□□□ 0.24
SCARB2-227ENST00000640957 MCM10Q7L590 875 aa16.56■□□□□ 0.24
SCARB2-227ENST00000640957 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
SCARB2-227ENST00000640957 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
SCARB2-227ENST00000640957 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
SCARB2-227ENST00000640957 KDM4AO75164 1064 aa16.55■□□□□ 0.24
SCARB2-227ENST00000640957 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-227ENST00000640957 GTPBP4Q9BZE4 634 aaKnown RBP16.55■□□□□ 0.24
SCARB2-227ENST00000640957 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
SCARB2-227ENST00000640957 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-227ENST00000640957 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
SCARB2-227ENST00000640957 UHRF1BP1LA0JNW5 1464 aa16.55■□□□□ 0.24
SCARB2-227ENST00000640957 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
SCARB2-227ENST00000640957 TMEM51Q9NW97 253 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms