RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
SPIN3-243ENST00000640717 IL17REQ8NFR9 667 aa16.09■□□□□ 0.17
SPIN3-243ENST00000640717 NPHP4O75161 1426 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-243ENST00000640717 AKAP12Q02952 1782 aa16.09■□□□□ 0.17
SPIN3-243ENST00000640717 GCP02774 474 aa16.09■□□□□ 0.17
SPIN3-243ENST00000640717 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
SPIN3-243ENST00000640717 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
SPIN3-243ENST00000640717 CHRNA2Q15822 529 aa16.08■□□□□ 0.17
SPIN3-243ENST00000640717 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.17
SPIN3-243ENST00000640717 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.17
SPIN3-243ENST00000640717 KCNQ3O43525 872 aa16.08■□□□□ 0.16
SPIN3-243ENST00000640717 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
SPIN3-243ENST00000640717 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
SPIN3-243ENST00000640717 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
SPIN3-243ENST00000640717 MEIS3Q99687 375 aa16.06■□□□□ 0.16
SPIN3-243ENST00000640717 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
SPIN3-243ENST00000640717 ATF3P18847 181 aa16.05■□□□□ 0.16
SPIN3-243ENST00000640717 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-243ENST00000640717 SMARCA5O60264 1052 aaPredicted RBP16.04■□□□□ 0.16
SPIN3-243ENST00000640717 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
SPIN3-243ENST00000640717 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
SPIN3-243ENST00000640717 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
SPIN3-243ENST00000640717 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-243ENST00000640717 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
SPIN3-243ENST00000640717 PIK3C2AO00443 1686 aa16.03■□□□□ 0.16
SPIN3-243ENST00000640717 IP6K1Q92551 441 aa16.03■□□□□ 0.16
SPIN3-243ENST00000640717 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
SPIN3-243ENST00000640717 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-243ENST00000640717 ARHGEF10O15013 1369 aa16.02■□□□□ 0.16
SPIN3-243ENST00000640717 NRKQ7Z2Y5 1582 aa16.02■□□□□ 0.16
SPIN3-243ENST00000640717 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.16
SPIN3-243ENST00000640717 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
SPIN3-243ENST00000640717 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-243ENST00000640717 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
SPIN3-243ENST00000640717 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 OTUD7AQ8TE49 926 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-243ENST00000640717 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
SPIN3-243ENST00000640717 CRB1P82279 1406 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 USP19O94966 1318 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 C19orf44Q9H6X5 657 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
SPIN3-243ENST00000640717 ADGRL3Q9HAR2 1447 aa16.01■□□□□ 0.15
SPIN3-243ENST00000640717 ABCC4O15439 1325 aa16■□□□□ 0.15
SPIN3-243ENST00000640717 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
SPIN3-243ENST00000640717 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
SPIN3-243ENST00000640717 SMC5Q8IY18 1101 aa16■□□□□ 0.15
SPIN3-243ENST00000640717 MSH6P52701 1360 aa16■□□□□ 0.15
SPIN3-243ENST00000640717 TSHZ3Q63HK5 1081 aa15.99■□□□□ 0.15
SPIN3-243ENST00000640717 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
SPIN3-243ENST00000640717 TEFQ10587 303 aa15.99■□□□□ 0.15
SPIN3-243ENST00000640717 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
SPIN3-243ENST00000640717 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
SPIN3-243ENST00000640717 ARHGAP45Q92619 1136 aa15.98■□□□□ 0.15
SPIN3-243ENST00000640717 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
SPIN3-243ENST00000640717 NUCB1Q02818 461 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 KCNH5Q8NCM2 988 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 FLIIQ13045 1269 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 ARHGEF25Q86VW2 580 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 DDRGK1Q96HY6 314 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
SPIN3-243ENST00000640717 KDRP35968 1356 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
SPIN3-243ENST00000640717 MAP3K5Q99683 1374 aa15.97■□□□□ 0.15
SPIN3-243ENST00000640717 AAMPQ13685 434 aa15.96■□□□□ 0.15
SPIN3-243ENST00000640717 EXOC6BQ9Y2D4 811 aa15.96■□□□□ 0.15
SPIN3-243ENST00000640717 USP35Q9P2H5 1018 aa15.95■□□□□ 0.14
SPIN3-243ENST00000640717 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
SPIN3-243ENST00000640717 HAP1P54257 671 aaPredicted RBP15.95■□□□□ 0.14
SPIN3-243ENST00000640717 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
SPIN3-243ENST00000640717 BRPF1P55201 1214 aaPredicted RBP15.94■□□□□ 0.14
SPIN3-243ENST00000640717 AIMP1Q12904 312 aaKnown RBP15.94■□□□□ 0.14
SPIN3-243ENST00000640717 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
SPIN3-243ENST00000640717 ADAMTSL3P82987 1691 aa15.93■□□□□ 0.14
SPIN3-243ENST00000640717 FMN2Q9NZ56 1722 aa15.93■□□□□ 0.14
SPIN3-243ENST00000640717 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
SPIN3-243ENST00000640717 CEP85Q6P2H3 762 aa15.93■□□□□ 0.14
SPIN3-243ENST00000640717 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
SPIN3-243ENST00000640717 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
SPIN3-243ENST00000640717 CHD2O14647 1828 aaKnown RBP15.92■□□□□ 0.14
SPIN3-243ENST00000640717 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
SPIN3-243ENST00000640717 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
SPIN3-243ENST00000640717 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
SPIN3-243ENST00000640717 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
SPIN3-243ENST00000640717 C22orf23Q9BZE7 217 aa15.91■□□□□ 0.14
SPIN3-243ENST00000640717 RGS12O14924 1447 aa15.9■□□□□ 0.14
SPIN3-243ENST00000640717 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
SPIN3-243ENST00000640717 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
SPIN3-243ENST00000640717 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
SPIN3-243ENST00000640717 RAPGEF4Q8WZA2 1011 aa15.89■□□□□ 0.13
SPIN3-243ENST00000640717 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
SPIN3-243ENST00000640717 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
SPIN3-243ENST00000640717 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
SPIN3-243ENST00000640717 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
SPIN3-243ENST00000640717 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
SPIN3-243ENST00000640717 MYL6BP14649 208 aa15.88■□□□□ 0.13
SPIN3-243ENST00000640717 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
SPIN3-243ENST00000640717 JARID2Q92833 1246 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms