RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 AFF2P51816 1311 aa23.35■■□□□ 1.33
SPIN3-238ENST00000640421 SPATA31A1Q5TZJ5 1347 aa23.35■■□□□ 1.33
SPIN3-238ENST00000640421 PKD1L3Q7Z443 1732 aa23.35■■□□□ 1.33
SPIN3-238ENST00000640421 TATP17735 454 aaPredicted RBP23.34■■□□□ 1.33
SPIN3-238ENST00000640421 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
SPIN3-238ENST00000640421 USP21Q9UK80 565 aa23.34■■□□□ 1.33
SPIN3-238ENST00000640421 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
SPIN3-238ENST00000640421 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
SPIN3-238ENST00000640421 WNK3Q9BYP7 1800 aa23.34■■□□□ 1.33
SPIN3-238ENST00000640421 DISP2A7MBM2 1401 aa23.33■■□□□ 1.33
SPIN3-238ENST00000640421 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.33
SPIN3-238ENST00000640421 IL2RBP14784 551 aa23.32■■□□□ 1.32
SPIN3-238ENST00000640421 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
SPIN3-238ENST00000640421 PLEKHO1Q53GL0 409 aaPredicted RBP23.32■■□□□ 1.32
SPIN3-238ENST00000640421 DCTN1Q14203 1278 aa23.31■■□□□ 1.32
SPIN3-238ENST00000640421 VPS72Q15906 364 aa23.31■■□□□ 1.32
SPIN3-238ENST00000640421 AMOTQ4VCS5 1084 aa23.31■■□□□ 1.32
SPIN3-238ENST00000640421 THUMPD2Q9BTF0 503 aaKnown RBP23.31■■□□□ 1.32
SPIN3-238ENST00000640421 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
SPIN3-238ENST00000640421 SHANK3Q9BYB0 1731 aa23.31■■□□□ 1.32
SPIN3-238ENST00000640421 PLEKHG2Q9H7P9 1386 aa23.31■■□□□ 1.32
SPIN3-238ENST00000640421 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
SPIN3-238ENST00000640421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.29■■□□□ 1.321e-6■□□□□ 10.8
SPIN3-238ENST00000640421 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
SPIN3-238ENST00000640421 MAP3K5Q99683 1374 aa23.29■■□□□ 1.32
SPIN3-238ENST00000640421 MCM10Q7L590 875 aa23.28■■□□□ 1.32
SPIN3-238ENST00000640421 GNAT3A8MTJ3 354 aa23.26■■□□□ 1.31
SPIN3-238ENST00000640421 CYP27B1O15528 508 aa23.26■■□□□ 1.31
SPIN3-238ENST00000640421 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
SPIN3-238ENST00000640421 SPG7Q9UQ90 795 aa23.26■■□□□ 1.31
SPIN3-238ENST00000640421 THRAP3Q9Y2W1 955 aaKnown RBP23.26■■□□□ 1.31
SPIN3-238ENST00000640421 LMOD3Q0VAK6 560 aa23.26■■□□□ 1.31
SPIN3-238ENST00000640421 WDR63Q8IWG1 891 aa23.26■■□□□ 1.31
SPIN3-238ENST00000640421 ATRNO75882 1429 aa23.25■■□□□ 1.31
SPIN3-238ENST00000640421 GLI3P10071 1580 aa23.25■■□□□ 1.31
SPIN3-238ENST00000640421 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
SPIN3-238ENST00000640421 ZCRB1Q8TBF4 217 aaKnown RBP23.25■■□□□ 1.31
SPIN3-238ENST00000640421 LRRC37A3O60309 1634 aa23.25■■□□□ 1.31
SPIN3-238ENST00000640421 VIRMAQ69YN4 1812 aaKnown RBP23.25■■□□□ 1.31
SPIN3-238ENST00000640421 PDE3BQ13370 1112 aa23.24■■□□□ 1.31
SPIN3-238ENST00000640421 IL17REQ8NFR9 667 aa23.24■■□□□ 1.31
SPIN3-238ENST00000640421 PHKG2P15735 406 aa23.24■■□□□ 1.31
SPIN3-238ENST00000640421 BARGINQ6ZT62 677 aa23.24■■□□□ 1.31
SPIN3-238ENST00000640421 SLFN5Q08AF3 891 aa23.23■■□□□ 1.31
SPIN3-238ENST00000640421 C1orf141Q5JVX7 400 aa23.23■■□□□ 1.31
SPIN3-238ENST00000640421 RTF1Q92541 710 aaKnown RBP23.22■■□□□ 1.31
SPIN3-238ENST00000640421 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
SPIN3-238ENST00000640421 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
SPIN3-238ENST00000640421 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
SPIN3-238ENST00000640421 FAM98CQ17RN3 349 aaKnown RBP23.22■■□□□ 1.31
SPIN3-238ENST00000640421 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
SPIN3-238ENST00000640421 KDM6AO15550 1401 aaPredicted RBP23.21■■□□□ 1.31
SPIN3-238ENST00000640421 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
SPIN3-238ENST00000640421 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
SPIN3-238ENST00000640421 TRMT2AQ8IZ69 625 aaKnown RBP23.21■■□□□ 1.31
SPIN3-238ENST00000640421 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.31
SPIN3-238ENST00000640421 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-238ENST00000640421 DUSP27Q5VZP5 1158 aa23.2■■□□□ 1.3
SPIN3-238ENST00000640421 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
SPIN3-238ENST00000640421 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-238ENST00000640421 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-238ENST00000640421 TNS2Q63HR2 1409 aa23.2■■□□□ 1.3
SPIN3-238ENST00000640421 IL16Q14005 1332 aa23.2■■□□□ 1.3
SPIN3-238ENST00000640421 E9PSI1 815 aa23.19■■□□□ 1.3
SPIN3-238ENST00000640421 CDCA7Q9BWT1 371 aaPredicted RBP23.19■■□□□ 1.3
SPIN3-238ENST00000640421 SCN11AQ9UI33 1791 aa23.19■■□□□ 1.3
SPIN3-238ENST00000640421 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
SPIN3-238ENST00000640421 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
SPIN3-238ENST00000640421 QTRT2Q9H974 415 aaKnown RBP23.18■■□□□ 1.3
SPIN3-238ENST00000640421 RNMTO43148 476 aaKnown RBP23.17■■□□□ 1.3
SPIN3-238ENST00000640421 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
SPIN3-238ENST00000640421 EXOC5O00471 708 aa23.16■■□□□ 1.3
SPIN3-238ENST00000640421 ZNF853P0CG23 659 aa23.16■■□□□ 1.3
SPIN3-238ENST00000640421 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
SPIN3-238ENST00000640421 FANCIQ9NVI1 1328 aa23.15■■□□□ 1.3
SPIN3-238ENST00000640421 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
SPIN3-238ENST00000640421 DDB1Q16531 1140 aa23.15■■□□□ 1.3
SPIN3-238ENST00000640421 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
SPIN3-238ENST00000640421 ILDR1Q86SU0 546 aaPredicted RBP23.14■■□□□ 1.29
SPIN3-238ENST00000640421 CFAP44Q96MT7 982 aa23.14■■□□□ 1.29
SPIN3-238ENST00000640421 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
SPIN3-238ENST00000640421 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.29
SPIN3-238ENST00000640421 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
SPIN3-238ENST00000640421 DCAF5Q96JK2 942 aa23.13■■□□□ 1.29
SPIN3-238ENST00000640421 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
SPIN3-238ENST00000640421 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
SPIN3-238ENST00000640421 RGS17Q9UGC6 210 aaPredicted RBP23.13■■□□□ 1.29
SPIN3-238ENST00000640421 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
SPIN3-238ENST00000640421 CHL1O00533 1208 aa23.11■■□□□ 1.29
SPIN3-238ENST00000640421 GNAI1P63096 354 aa23.11■■□□□ 1.29
SPIN3-238ENST00000640421 MYH16Q9H6N6 1097 aa23.11■■□□□ 1.29
SPIN3-238ENST00000640421 MRC1P22897 1456 aa23.11■■□□□ 1.29
SPIN3-238ENST00000640421 EP400Q96L91 3159 aa23.11■■□□□ 1.29
SPIN3-238ENST00000640421 ONECUT3O60422 494 aaPredicted RBP23.11■■□□□ 1.29
SPIN3-238ENST00000640421 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
SPIN3-238ENST00000640421 MARCH10Q8NA82 808 aaPredicted RBP23.11■■□□□ 1.29
SPIN3-238ENST00000640421 A0A0G2JS52 829 aa23.09■■□□□ 1.29
SPIN3-238ENST00000640421 MYT1Q01538 1121 aa23.09■■□□□ 1.29
SPIN3-238ENST00000640421 TEFQ10587 303 aa23.09■■□□□ 1.29
SPIN3-238ENST00000640421 TAF7Q15545 349 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms