RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 EVC2Q86UK5 1308 aa16.53■□□□□ 0.24
MECP2-226ENST00000640414 PRIM1P49642 420 aaKnown RBP16.53■□□□□ 0.24
MECP2-226ENST00000640414 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
MECP2-226ENST00000640414 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
MECP2-226ENST00000640414 USP54Q70EL1 1684 aa16.51■□□□□ 0.23
MECP2-226ENST00000640414 USP31Q70CQ4 1352 aa16.51■□□□□ 0.23
MECP2-226ENST00000640414 WWC3Q9ULE0 1092 aa16.5■□□□□ 0.23
MECP2-226ENST00000640414 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
MECP2-226ENST00000640414 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
MECP2-226ENST00000640414 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
MECP2-226ENST00000640414 CAPN15O75808 1086 aa16.48■□□□□ 0.23
MECP2-226ENST00000640414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.235e-7■■■■□ 20.4
MECP2-226ENST00000640414 NME9Q86XW9 330 aa16.47■□□□□ 0.23
MECP2-226ENST00000640414 C5P01031 1676 aa16.46■□□□□ 0.23
MECP2-226ENST00000640414 TOMM70O94826 608 aa16.46■□□□□ 0.23
MECP2-226ENST00000640414 WDR90Q96KV7 1748 aa16.45■□□□□ 0.22
MECP2-226ENST00000640414 USP47Q96K76 1375 aa16.45■□□□□ 0.22
MECP2-226ENST00000640414 FAM208AQ9UK61 1670 aaKnown RBP16.45■□□□□ 0.22
MECP2-226ENST00000640414 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
MECP2-226ENST00000640414 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
MECP2-226ENST00000640414 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
MECP2-226ENST00000640414 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
MECP2-226ENST00000640414 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
MECP2-226ENST00000640414 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
MECP2-226ENST00000640414 CD163L1Q9NR16 1453 aa16.42■□□□□ 0.22
MECP2-226ENST00000640414 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
MECP2-226ENST00000640414 IP6K1Q92551 441 aa16.41■□□□□ 0.22
MECP2-226ENST00000640414 KLRG1Q96E93 195 aa16.41■□□□□ 0.22
MECP2-226ENST00000640414 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
MECP2-226ENST00000640414 MEGF6O75095 1541 aa16.4■□□□□ 0.22
MECP2-226ENST00000640414 PRELPP51888 382 aa16.4■□□□□ 0.22
MECP2-226ENST00000640414 HTRA3P83110 453 aa16.4■□□□□ 0.22
MECP2-226ENST00000640414 AMIGO3Q86WK7 504 aa16.4■□□□□ 0.22
MECP2-226ENST00000640414 TNS4Q8IZW8 715 aa16.4■□□□□ 0.22
MECP2-226ENST00000640414 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
MECP2-226ENST00000640414 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
MECP2-226ENST00000640414 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
MECP2-226ENST00000640414 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
MECP2-226ENST00000640414 SMIM5Q71RC9 77 aa16.37■□□□□ 0.21
MECP2-226ENST00000640414 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
MECP2-226ENST00000640414 UBR3Q6ZT12 1888 aa16.36■□□□□ 0.21
MECP2-226ENST00000640414 PHF14O94880 888 aa16.35■□□□□ 0.21
MECP2-226ENST00000640414 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
MECP2-226ENST00000640414 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
MECP2-226ENST00000640414 HMGB2P26583 209 aaKnown RBP16.34■□□□□ 0.21
MECP2-226ENST00000640414 AK7Q96M32 723 aa16.34■□□□□ 0.21
MECP2-226ENST00000640414 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
MECP2-226ENST00000640414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
MECP2-226ENST00000640414 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
MECP2-226ENST00000640414 HOXC9P31274 260 aa16.32■□□□□ 0.2
MECP2-226ENST00000640414 MAP3K19Q56UN5 1328 aa16.32■□□□□ 0.2
MECP2-226ENST00000640414 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
MECP2-226ENST00000640414 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
MECP2-226ENST00000640414 NSD3Q9BZ95 1437 aa16.31■□□□□ 0.2
MECP2-226ENST00000640414 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
MECP2-226ENST00000640414 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
MECP2-226ENST00000640414 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
MECP2-226ENST00000640414 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
MECP2-226ENST00000640414 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
MECP2-226ENST00000640414 A0A1W2PP64 1363 aa16.3■□□□□ 0.2
MECP2-226ENST00000640414 SSFA2P28290 1259 aa16.3■□□□□ 0.2
MECP2-226ENST00000640414 FSTL1Q12841 308 aa16.3■□□□□ 0.2
MECP2-226ENST00000640414 L3MBTL2Q969R5 705 aa16.3■□□□□ 0.2
MECP2-226ENST00000640414 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
MECP2-226ENST00000640414 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 FBLN1P23142 703 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 AMPHP49418 695 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
MECP2-226ENST00000640414 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
MECP2-226ENST00000640414 CLSPNQ9HAW4 1339 aa16.28■□□□□ 0.2
MECP2-226ENST00000640414 ITGB4P16144 1822 aa16.27■□□□□ 0.2
MECP2-226ENST00000640414 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
MECP2-226ENST00000640414 MMP10P09238 476 aa16.27■□□□□ 0.2
MECP2-226ENST00000640414 TGFB2P61812 414 aa16.27■□□□□ 0.2
MECP2-226ENST00000640414 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
MECP2-226ENST00000640414 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
MECP2-226ENST00000640414 MAP2P11137 1827 aaKnown RBP16.26■□□□□ 0.19
MECP2-226ENST00000640414 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
MECP2-226ENST00000640414 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
MECP2-226ENST00000640414 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
MECP2-226ENST00000640414 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
MECP2-226ENST00000640414 SIN3AQ96ST3 1273 aa16.26■□□□□ 0.19
MECP2-226ENST00000640414 TERF2IPQ9NYB0 399 aa16.26■□□□□ 0.19
MECP2-226ENST00000640414 KCPQ6ZWJ8 1503 aa16.25■□□□□ 0.19
MECP2-226ENST00000640414 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
MECP2-226ENST00000640414 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
MECP2-226ENST00000640414 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
MECP2-226ENST00000640414 CYP27B1O15528 508 aa16.24■□□□□ 0.19
MECP2-226ENST00000640414 DPEP1P16444 411 aa16.24■□□□□ 0.19
MECP2-226ENST00000640414 TATP17735 454 aaPredicted RBP16.24■□□□□ 0.19
MECP2-226ENST00000640414 COG3Q96JB2 828 aa16.24■□□□□ 0.19
MECP2-226ENST00000640414 BRCA1P38398 1863 aaKnown RBP16.24■□□□□ 0.19
MECP2-226ENST00000640414 GNPATO15228 680 aa16.23■□□□□ 0.19
MECP2-226ENST00000640414 FCHSD2O94868 740 aa16.23■□□□□ 0.19
MECP2-226ENST00000640414 HSPA1AP0DMV8 641 aaKnown RBP16.23■□□□□ 0.19
MECP2-226ENST00000640414 HSPA1BP0DMV9 641 aaKnown RBP16.23■□□□□ 0.19
MECP2-226ENST00000640414 PIGBQ92521 554 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms