RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 EZH2Q15910 746 aaKnown RBP13.7□□□□□ -0.22
KCNMA1-280ENST00000640311 ZCRB1Q8TBF4 217 aaKnown RBP13.7□□□□□ -0.22
KCNMA1-280ENST00000640311 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
KCNMA1-280ENST00000640311 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 EYA1Q99502 592 aa13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 BCL11BQ9C0K0 894 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 MEGF6O75095 1541 aa13.69□□□□□ -0.22
KCNMA1-280ENST00000640311 TNS1Q9HBL0 1735 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-280ENST00000640311 PTF1AQ7RTS3 328 aa13.68□□□□□ -0.22
KCNMA1-280ENST00000640311 BCL9O00512 1426 aa13.67□□□□□ -0.22
KCNMA1-280ENST00000640311 KCNQ2O43526 872 aa13.67□□□□□ -0.22
KCNMA1-280ENST00000640311 MTHFSP49914 203 aa13.67□□□□□ -0.22
KCNMA1-280ENST00000640311 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-280ENST00000640311 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
KCNMA1-280ENST00000640311 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
KCNMA1-280ENST00000640311 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
KCNMA1-280ENST00000640311 NPC1L1Q9UHC9 1359 aa13.65□□□□□ -0.22
KCNMA1-280ENST00000640311 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
KCNMA1-280ENST00000640311 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
KCNMA1-280ENST00000640311 PLSCR1O15162 318 aa13.64□□□□□ -0.23
KCNMA1-280ENST00000640311 PSDA5PKW4 1024 aaPredicted RBP13.63□□□□□ -0.23
KCNMA1-280ENST00000640311 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
KCNMA1-280ENST00000640311 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
KCNMA1-280ENST00000640311 NBPF14Q5TI25 921 aa13.62□□□□□ -0.23
KCNMA1-280ENST00000640311 SBF2Q86WG5 1849 aa13.62□□□□□ -0.23
KCNMA1-280ENST00000640311 DIAPH1O60610 1272 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-280ENST00000640311 IL13P35225 146 aa13.61□□□□□ -0.23
KCNMA1-280ENST00000640311 R3HDM1Q15032 1099 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-280ENST00000640311 SULT6B1Q6IMI4 303 aa13.61□□□□□ -0.23
KCNMA1-280ENST00000640311 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
KCNMA1-280ENST00000640311 CYP27B1O15528 508 aa13.6□□□□□ -0.23
KCNMA1-280ENST00000640311 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
KCNMA1-280ENST00000640311 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
KCNMA1-280ENST00000640311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.23
KCNMA1-280ENST00000640311 NHSQ6T4R5 1651 aa13.59□□□□□ -0.23
KCNMA1-280ENST00000640311 TXNRD1Q16881 649 aa13.59□□□□□ -0.23
KCNMA1-280ENST00000640311 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
KCNMA1-280ENST00000640311 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
KCNMA1-280ENST00000640311 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
KCNMA1-280ENST00000640311 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
KCNMA1-280ENST00000640311 HMOX1P09601 288 aa13.58□□□□□ -0.24
KCNMA1-280ENST00000640311 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
KCNMA1-280ENST00000640311 PHKG2P15735 406 aa13.57□□□□□ -0.24
KCNMA1-280ENST00000640311 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
KCNMA1-280ENST00000640311 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
KCNMA1-280ENST00000640311 MPRIPQ6WCQ1 1025 aa13.57□□□□□ -0.24
KCNMA1-280ENST00000640311 PROM2Q8N271 834 aa13.57□□□□□ -0.24
KCNMA1-280ENST00000640311 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
KCNMA1-280ENST00000640311 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
KCNMA1-280ENST00000640311 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-280ENST00000640311 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
KCNMA1-280ENST00000640311 RREB1Q92766 1687 aa13.55□□□□□ -0.24
KCNMA1-280ENST00000640311 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
KCNMA1-280ENST00000640311 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
KCNMA1-280ENST00000640311 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
KCNMA1-280ENST00000640311 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
KCNMA1-280ENST00000640311 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
KCNMA1-280ENST00000640311 BTAF1O14981 1849 aa13.54□□□□□ -0.24
KCNMA1-280ENST00000640311 KDRP35968 1356 aa13.54□□□□□ -0.24
KCNMA1-280ENST00000640311 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
KCNMA1-280ENST00000640311 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
KCNMA1-280ENST00000640311 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-280ENST00000640311 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
KCNMA1-280ENST00000640311 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
KCNMA1-280ENST00000640311 KCNQ4P56696 695 aa13.52□□□□□ -0.25
KCNMA1-280ENST00000640311 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
KCNMA1-280ENST00000640311 PIGBQ92521 554 aa13.52□□□□□ -0.25
KCNMA1-280ENST00000640311 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
KCNMA1-280ENST00000640311 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
KCNMA1-280ENST00000640311 CCNL1Q9UK58 526 aaPredicted RBP13.52□□□□□ -0.25
KCNMA1-280ENST00000640311 SLC15A2Q16348 729 aa13.51□□□□□ -0.25
KCNMA1-280ENST00000640311 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
KCNMA1-280ENST00000640311 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-280ENST00000640311 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
KCNMA1-280ENST00000640311 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-280ENST00000640311 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
KCNMA1-280ENST00000640311 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-280ENST00000640311 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
KCNMA1-280ENST00000640311 CABP4P57796 275 aa13.49□□□□□ -0.25
KCNMA1-280ENST00000640311 RALBP1Q15311 655 aa13.49□□□□□ -0.25
KCNMA1-280ENST00000640311 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
KCNMA1-280ENST00000640311 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
KCNMA1-280ENST00000640311 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
KCNMA1-280ENST00000640311 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
KCNMA1-280ENST00000640311 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
KCNMA1-280ENST00000640311 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
KCNMA1-280ENST00000640311 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
KCNMA1-280ENST00000640311 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
KCNMA1-280ENST00000640311 HMGB2P26583 209 aaKnown RBP13.46□□□□□ -0.25
KCNMA1-280ENST00000640311 ZNF827Q17R98 1081 aa13.46□□□□□ -0.25
KCNMA1-280ENST00000640311 PDGFDQ9GZP0 370 aaPredicted RBP13.46□□□□□ -0.25
KCNMA1-280ENST00000640311 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
KCNMA1-280ENST00000640311 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.26
KCNMA1-280ENST00000640311 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
KCNMA1-280ENST00000640311 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
KCNMA1-280ENST00000640311 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
KCNMA1-280ENST00000640311 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms