RNA–Protein interactions for RNA: ENST00000639607.1

SPIN3-226, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,942 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-226ENST00000639607 SBNO1A3KN83 1393 aa16.41■□□□□ 0.22
SPIN3-226ENST00000639607 CEP170BQ9Y4F5 1589 aaPredicted RBP16.4■□□□□ 0.22
SPIN3-226ENST00000639607 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
SPIN3-226ENST00000639607 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
SPIN3-226ENST00000639607 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
SPIN3-226ENST00000639607 UPF2Q9HAU5 1272 aaKnown RBP16.39■□□□□ 0.21
SPIN3-226ENST00000639607 ABCC4O15439 1325 aa16.39■□□□□ 0.21
SPIN3-226ENST00000639607 NUCB1Q02818 461 aa16.39■□□□□ 0.21
SPIN3-226ENST00000639607 LRRC59Q96AG4 307 aaKnown RBP16.39■□□□□ 0.21
SPIN3-226ENST00000639607 API5Q9BZZ5 524 aaKnown RBP16.38■□□□□ 0.21
SPIN3-226ENST00000639607 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
SPIN3-226ENST00000639607 MEIS3Q99687 375 aa16.38■□□□□ 0.21
SPIN3-226ENST00000639607 BRPF1P55201 1214 aaPredicted RBP16.37■□□□□ 0.21
SPIN3-226ENST00000639607 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
SPIN3-226ENST00000639607 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
SPIN3-226ENST00000639607 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
SPIN3-226ENST00000639607 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
SPIN3-226ENST00000639607 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
SPIN3-226ENST00000639607 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 PIK3C2AO00443 1686 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 CRB1P82279 1406 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
SPIN3-226ENST00000639607 NBPF6Q5VWK0 638 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 NBPF4Q96M43 638 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
SPIN3-226ENST00000639607 FRAT2O75474 233 aaPredicted RBP16.34■□□□□ 0.21
SPIN3-226ENST00000639607 MSH6P52701 1360 aa16.34■□□□□ 0.21
SPIN3-226ENST00000639607 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
SPIN3-226ENST00000639607 GAS2L2Q8NHY3 880 aa16.34■□□□□ 0.21
SPIN3-226ENST00000639607 OTUD7AQ8TE49 926 aaPredicted RBP16.34■□□□□ 0.21
SPIN3-226ENST00000639607 C22orf23Q9BZE7 217 aa16.33■□□□□ 0.21
SPIN3-226ENST00000639607 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
SPIN3-226ENST00000639607 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
SPIN3-226ENST00000639607 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
SPIN3-226ENST00000639607 XRN1Q8IZH2 1706 aaKnown RBP16.32■□□□□ 0.2
SPIN3-226ENST00000639607 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-226ENST00000639607 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-226ENST00000639607 KDRP35968 1356 aa16.31■□□□□ 0.2
SPIN3-226ENST00000639607 NALCNQ8IZF0 1738 aa16.3■□□□□ 0.2
SPIN3-226ENST00000639607 RGS12O14924 1447 aa16.3■□□□□ 0.2
SPIN3-226ENST00000639607 ANXA1P04083 346 aa16.3■□□□□ 0.2
SPIN3-226ENST00000639607 KCNQ3O43525 872 aa16.29■□□□□ 0.2
SPIN3-226ENST00000639607 ZC3H6P61129 1189 aaKnown RBP16.29■□□□□ 0.2
SPIN3-226ENST00000639607 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
SPIN3-226ENST00000639607 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
SPIN3-226ENST00000639607 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
SPIN3-226ENST00000639607 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
SPIN3-226ENST00000639607 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
SPIN3-226ENST00000639607 BECN1Q14457 450 aa16.29■□□□□ 0.2
SPIN3-226ENST00000639607 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
SPIN3-226ENST00000639607 TSHZ3Q63HK5 1081 aa16.28■□□□□ 0.2
SPIN3-226ENST00000639607 GCP02774 474 aa16.27■□□□□ 0.2
SPIN3-226ENST00000639607 RGPD1P0DJD0 1748 aa16.27■□□□□ 0.2
SPIN3-226ENST00000639607 KIAA0232Q92628 1395 aa16.27■□□□□ 0.19
SPIN3-226ENST00000639607 IP6K1Q92551 441 aa16.27■□□□□ 0.19
SPIN3-226ENST00000639607 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.19
SPIN3-226ENST00000639607 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.19
SPIN3-226ENST00000639607 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.19
SPIN3-226ENST00000639607 FLIIQ13045 1269 aa16.26■□□□□ 0.19
SPIN3-226ENST00000639607 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
SPIN3-226ENST00000639607 HSPA2P54652 639 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 CABLES1Q8TDN4 633 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 EXOC6BQ9Y2D4 811 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 RTL1A6NKG5 1358 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 TAF7Q15545 349 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-226ENST00000639607 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-226ENST00000639607 HAP1P54257 671 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-226ENST00000639607 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
SPIN3-226ENST00000639607 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
SPIN3-226ENST00000639607 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
SPIN3-226ENST00000639607 DCTPP1Q9H773 170 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 FMN2Q9NZ56 1722 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 PTPRCP08575 1304 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
SPIN3-226ENST00000639607 BMP2KLQ5H9B9 411 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 PLEKHM2Q8IWE5 1019 aa16.24■□□□□ 0.19
SPIN3-226ENST00000639607 KRT28Q7Z3Y7 464 aa16.23■□□□□ 0.19
SPIN3-226ENST00000639607 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
SPIN3-226ENST00000639607 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
SPIN3-226ENST00000639607 CCDC30Q5VVM6 783 aa16.22■□□□□ 0.19
SPIN3-226ENST00000639607 NWD1Q149M9 1564 aa16.22■□□□□ 0.19
SPIN3-226ENST00000639607 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
SPIN3-226ENST00000639607 PRAMEF22A3QJZ6 481 aa16.21■□□□□ 0.19
SPIN3-226ENST00000639607 PNMA6EA0A0J9YXQ4 647 aa16.21■□□□□ 0.18
SPIN3-226ENST00000639607 TEFQ10587 303 aa16.2■□□□□ 0.18
SPIN3-226ENST00000639607 CHD2O14647 1828 aaKnown RBP16.2■□□□□ 0.18
SPIN3-226ENST00000639607 KCNH5Q8NCM2 988 aa16.2■□□□□ 0.18
SPIN3-226ENST00000639607 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
SPIN3-226ENST00000639607 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
SPIN3-226ENST00000639607 USP35Q9P2H5 1018 aa16.19■□□□□ 0.18
SPIN3-226ENST00000639607 LRRFIP2Q9Y608 721 aaKnown RBP16.19■□□□□ 0.18
SPIN3-226ENST00000639607 MARF1Q9Y4F3 1742 aaKnown RBP16.19■□□□□ 0.18
SPIN3-226ENST00000639607 CD2BP2O95400 341 aaKnown RBP16.19■□□□□ 0.18
SPIN3-226ENST00000639607 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
SPIN3-226ENST00000639607 ARHGEF25Q86VW2 580 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms